Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1082 ATGGCTTCAAATGTACACAGAAATGGCGTCCAAAGGGGAAGCGCCAAGTTCGATCGGATGGTTGCGGCTGGTGCAAACTTGAAAACGGCGTCGTTCAAACCAAGGGTTCCTCCGTCCTCGCAGTCTCCGGGATCCGCTCTTCGTCGGAGCAGCCCGGCCTCTTTGGCGGCTAGAAACGGAGATGGAGTTCCTGGAAGAGTTCGAGTGGCTGTAAGATTGAGACCTCGCAATGCTGAAGAAATGGTGGCGGATGCTGATTTTGCTGACTGTGTTGAATTGCAACCAGAGCTTAAAAGGTTGAAACTTCGAAAAAACAATTGGGATTCAGACACATTTGAATTTGATGAAGTGTTGACTGAATTTGCATCACAGAAGCGTGTCTATGAAGTTGTAGCTAAGCCAGTAGTGGAGAGTGTTCTTGATGGTTACAATGGGACGGTAATGGCTTATGGTCAAACTGGAACGGGGAAAACTTTTACTGTTGGACGATTGGGGGAAGAGGACACCTCTGATCGTGGTATCATGGTTCGTTCCATGGAGGATATTTTAGCAGATCTATCTCCAGAAACTGATTCTATCACTGTCTCGTATCTGCAGCTATACATGGAAACTCTCCAGGACTTGCTTAATCCAGCAAATGATAACATTCCTATAGTGGAAGATCCAAGAACTGGTGATGTATCTGTGCCTGGGGCAACTCTTGTAGAAATCAGGGACCAACAGAGTTTTTTGGAGTTGCTAAGAGTGGGGGAAGCTCATCGATTTGCTGCCAACACAAAGTTGAATACTGAATCTTCTCGTAGTCATGCTATTCTGATGGTAAATGTTAAGAGGTCTGTCATAGAAAGTGAAGATATTGTTTCTAGTGAAAATGAGGGTGCTTCTCATTTTACTAAACCTTCAAAACCACTTGTTCGGAAGAGCAAACTGGTTGTAGTAGATTTGGCAGGTTCAGAGCGTATCCATAAGTCAGGGAGTGAAGGACATACGCTAGAGGAAGCTAAATCTATAAATCTTTCACTTAGTGCATTGGGAAAATGTATTAATGCTCTAGCAGAGAACAATGCTCATGTTCCAATTCGTGATTCAAAGCTTACTAGGTTGCTCAGAGATTCCTTTGGAGGCACTGCTAGGACTTCTTTGATTGTGACTATTGGACCATCTCCACGTCATCGAGGGGAGACCGCAAGTACCATACTGTTTGGCCAAAGGGCTATGAAAGTGGAGAATATGTTGAAAATAAAGGAAGAGTTTGATTATAAAAGTTTGTCCCGGAGGCTTGAGGTACAATTAGATAAGCTAATTGCGGAAAATGAAAGGCAGCAGAAAGCTTTCGAGGAGGAAATTGACAGAATAAATTTGGAGGCACAAAGTCGTATTGCTGAGGTTGAGAGGAATTTTGCTGATGCATTGGAGAAAGAAAGGTTGAAATGCCAGTTGGAGTATATGGATTCAGTTAAGCAGTTAGAGCATAAGTTGGTGTTGAGTCAAGAAAGATATGACTGCAATGGCTTTGTGGATGGTCATGAAGAGGGGCCTGGGCCATCTTCTGCAGATGAAGTTGCTGAGGTCAAAAGGCTGCTTGAAAATGAAATTCATCGGAGAAAGGCAGCTGAAGAAGAGGTAGAATATCTAAAAAGTCAACAGGGGAAATATTCCCAAGCAGAGGTGGGAGGGGATTCAGAGATTCTAAATCTTCGCAACATTCTGGAGGATGAGGCTCATCAGAAAAGGAAACTTGAAGAAGAGATAATAATATTACGAAGTCAGTTATTACAATTGAATTATGAATCTGACCAGATGAGAAGGTGTTTGGAAAGTGGTGGCTCTGGAAATGAATTGCCTGCCTTGGATTCTTCCATTTCTCAAGTTAGGCATTCCCAGCTCAGAGACACTGGGAATGGTCAGAAGACATCCGTGGCTACACTTTTTGAACAAGTTGGATTGCAAAAGATTTTGTCATTGCTGGAGTCAGATGATGCCAATGTACGTATTCATGCTGTGAAAGTGGTGGCCAACCTTGCGGCTGAAGAGGCAAACCAAAAAAGAATTGTAGAAGCTGGCGGTCTTACTTCCTTGCTTATGCTTCTTAGAAGATATGAGGATGAAACTGTTCGCAGAGTAGCAGCAGGGGCAATTGCCAATCTTGCCATGAATGAAGCCAATCAAGAACTTATAATGGCCGAAGGCGGAATTACTCTCTTATCAATGACTGCATCTGATGCTGAAGATCCACAAACTCTTCGAATGGTAGCTGGCGCTATTGCAAATCTATGCGGAAATGATAAGTTATTAATGAAGCTGAGATCTCAGGGAGGTATAAAGGCTTTACTGGGAATTGTAAGATGTGGACATCCTGATGTTCTTTCCCAAGTTGCACGAGGAATTGCCAACTTTGCAAAATGCGAGTCTCGTGCTTCCAGTCAAGGGATAAAAAGTGGTAGATCTTTTTTAATAGAAGATGGTGCTCTTCCATGGATAGTACAAAATGCTAACGATGAAGCTGCGCCAATCAGGCGCCACATTGAGCTTGCACTCTGCCACTTGGCACAGCACGAAGTGAATGCAAAAGACATGATAAGTGGAGGTGCCCTTTGGGAGCTAGTCCGGATTTCAAGGGATTGTTCAAGAGAGGACATAAGGAGTCTTGCCCGGCGGACTCTGAGCTCTATCTCCACATTCAAATCTGAATTGCGGCGACTGCGTATAGAGTATTGA 2718 0.4371 MASNVHRNGVQRGSAKFDRMVAAGANLKTASFKPRVPPSSQSPGSALRRSSPASLAARNGDGVPGRVRVAVRLRPRNAEEMVADADFADCVELQPELKRLKLRKNNWDSDTFEFDEVLTEFASQKRVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTFTVGRLGEEDTSDRGIMVRSMEDILADLSPETDSITVSYLQLYMETLQDLLNPANDNIPIVEDPRTGDVSVPGATLVEIRDQQSFLELLRVGEAHRFAANTKLNTESSRSHAILMVNVKRSVIESEDIVSSENEGASHFTKPSKPLVRKSKLVVVDLAGSERIHKSGSEGHTLEEAKSINLSLSALGKCINALAENNAHVPIRDSKLTRLLRDSFGGTARTSLIVTIGPSPRHRGETASTILFGQRAMKVENMLKIKEEFDYKSLSRRLEVQLDKLIAENERQQKAFEEEIDRINLEAQSRIAEVERNFADALEKERLKCQLEYMDSVKQLEHKLVLSQERYDCNGFVDGHEEGPGPSSADEVAEVKRLLENEIHRRKAAEEEVEYLKSQQGKYSQAEVGGDSEILNLRNILEDEAHQKRKLEEEIIILRSQLLQLNYESDQMRRCLESGGSGNELPALDSSISQVRHSQLRDTGNGQKTSVATLFEQVGLQKILSLLESDDANVRIHAVKVVANLAAEEANQKRIVEAGGLTSLLMLLRRYEDETVRRVAAGAIANLAMNEANQELIMAEGGITLLSMTASDAEDPQTLRMVAGAIANLCGNDKLLMKLRSQGGIKALLGIVRCGHPDVLSQVARGIANFAKCESRASSQGIKSGRSFLIEDGALPWIVQNANDEAAPIRRHIELALCHLAQHEVNAKDMISGGALWELVRISRDCSREDIRSLARRTLSSISTFKSELRRLRIEY 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1082 905 CDD KISc 66 406 - -
Glsi07g1082 905 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 444 IPR027417 -
Glsi07g1082 905 MobiDBLite consensus disorder prediction 33 49 - -
Glsi07g1082 905 PANTHER CENTROMERE PROTEIN E 66 634 IPR027640 GO:0003777|GO:0007018
Glsi07g1082 905 MobiDBLite consensus disorder prediction 28 61 - -
Glsi07g1082 905 Coils Coil 563 597 - -
Glsi07g1082 905 SUPERFAMILY ARM repeat 636 899 IPR016024 -
Glsi07g1082 905 Gene3D - 629 737 IPR011989 -
Glsi07g1082 905 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 688 731 IPR000225 GO:0005515
Glsi07g1082 905 SMART arm_5 677 718 IPR000225 GO:0005515
Glsi07g1082 905 SMART arm_5 637 676 IPR000225 GO:0005515
Glsi07g1082 905 SMART arm_5 761 801 IPR000225 GO:0005515
Glsi07g1082 905 SMART arm_5 851 893 IPR000225 GO:0005515
Glsi07g1082 905 SMART arm_5 719 760 IPR000225 GO:0005515
Glsi07g1082 905 Pfam Armadillo/beta-catenin-like repeat 680 717 IPR000225 GO:0005515
Glsi07g1082 905 Coils Coil 521 548 - -
Glsi07g1082 905 Gene3D - 738 903 IPR011989 -
Glsi07g1082 905 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 647 689 IPR000225 GO:0005515
Glsi07g1082 905 Coils Coil 424 473 - -
Glsi07g1082 905 Gene3D Kinesin motor domain 61 438 IPR036961 -
Glsi07g1082 905 PRINTS Kinesin heavy chain signature 358 379 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi07g1082 905 PRINTS Kinesin heavy chain signature 142 163 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi07g1082 905 PRINTS Kinesin heavy chain signature 309 327 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi07g1082 905 FunFam Kinesin-like protein 58 438 - -
Glsi07g1082 905 ProSitePatterns Kinesin motor domain signature. 308 319 IPR019821 GO:0003777|GO:0005524|GO:0007018
Glsi07g1082 905 SMART kinesin_4 64 416 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi07g1082 905 Pfam Kinesin motor domain 72 408 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi07g1082 905 FunFam Kinesin-like protein 617 893 - -
Glsi07g1082 905 ProSiteProfiles Kinesin motor domain profile. 66 408 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1082 Glsi-ChrGlsi07 14635286 14655944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1082 61 455 Calmodulin-binding Proteins AT5G65930 34.709 5.44e-48 184