Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1073 ATGTTAGGTAAGTTCGACCATCTTAAAATAGTTCTTCCTTTATTGTTACTGAACTCTAGAAATATTTATAGTTTTGACATGCAATATGACTACGATGCAAAGCTTTCTGACTTTGGACTTACTAAAGATGGACCTGTTGGAGACAAATATCACGTCTCTACTTGCACAATGGGAACATATGGGTATGCTGCACCTGAATATATATTGTCAGGTCATCTAACTCCTAGAAGTCATGCTTTCAGTTTTGGCATTGCTCTTCTTGAACTTTTTACTGGAAGAAAATCTCTAGATTAG 294 0.3571 MLGKFDHLKIVLPLLLLNSRNIYSFDMQYDYDAKLSDFGLTKDGPVGDKYHVSTCTMGTYGYAAPEYILSGHLTPRSHAFSFGIALLELFTGRKSLD 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1073 97 SUPERFAMILY Protein kinase-like (PK-like) 28 94 IPR011009 -
Glsi07g1073 97 PANTHER OS01G0588500 PROTEIN-RELATED 29 97 - -
Glsi07g1073 97 Pfam Protein tyrosine and serine/threonine kinase 30 94 IPR001245 GO:0004672|GO:0006468
Glsi07g1073 97 ProSiteProfiles Protein kinase domain profile. 1 97 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1073 97 Gene3D Transferase(Phosphotransferase) domain 1 14 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1073 Glsi-ChrGlsi07 14442130 14442848 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1073 30 97 Glycoside Hydrolase AT3G07070 63.235 8.67e-26 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Glsi07g1073 PK_Tyr_Ser-Thr 1e-09 CL0016