Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1064 ATGGCGGCTAATCTTCCTGCGAAGAGCGCCACAAGTTCTACGGCTGCGGTTTCTCAGGAAAAACGACACCGTTCCATCTTCGAACTTCCGCCCGGCTTCTTCAACTCCTGTCGCCTCCTTCCTTCTCTTCAATCGTCCGTCTCGGAGCCCCTTCAGAATTTCGATAACTCAGTCCTTGAAACCCTTGACCCCGTTGAGAACGACATCAATGGCTCCCAAAACGTCGTTGTATCGGTACCTAGGTGGACCTGCAATACCTGCAAGGCTCAATTTGAGTCCCTTCAAGATCAACGTTTGCATTTCAAATCGGATATTCATAGGTTCAATGTGAAGTTGACAGTTGCTGGAAAGACTATATTGAAGGAAGAAGATTTTGAGGTGTTGACATCTGATTCTATCAAAGACTTTGATGTTTCAAGTATATCAGGATCCGAAGATGATGATGATAGAGAAATTGAGTCTCAAAGTCAAAATGACGTGCATAACAAATTAACTGAAAGTTTTAGGCAAAAGCTATTTATCTGTCTTCAAACAGGGCAGAGAGTTTCTATTTGGAAGTGCTTAGTAATGAACTTGACTGAGAATGTATTGTATGATAATGAAAAAGCCGAGAATGAAGTGATTGAGAGGCTGAAATCTCTTACGCTTGAGCCCAGGAATAATACTCACTTGAGAATAGTGCTGCTGGCATCTGGTGGGCACTTTGCTGGTTGTGTCTTTGACGGTGATGCGGTTGTGGCTCACAAGACATTCCACAGATATGTTGTGAGGGCCAAGGCAGGAAAAAAACAGTCATCAAAAGATGCTTCTGGCAGGGCTGCACATTCTGCTGGGGCTTCACTTCGTCGTCATAATGAACTTGCATTAAAGAAGGAAATTCAAGAACTTCTTACTTCTTGGAGAACTTACTTTGATGCTTCAAATTGCATTTTCCTACATGCTGCCTCAAGTAGTCGTCAACTACTCTTTGATGGAGAAAGACCATATTTTGGCACTCAGCATTGTGTTGTTAGAAATATTCCATTGACTGTTCGGAGGCCCACTCTCAGGGAAGCAAAGCGTGTATATAACCAGTTGACCCAAGTATCCTGTGAAGCAGATGAGAAGGAAACTTTACAATGCAACCAAGAGGATTTAATGTCAACTCCTATTTCTATAAGAAATGGCAACCCAGTCACCAGCAAAGGGGACATGGCTAACTTGGATGACAAGGATAAAAGTGAAGCTTGTTCAAGTAAACAAGATAATCTTAAACCCCTTATTTCCAGTGCTAGTGAGAGTGATAATGAGATACCTGGTATATCAACTCCTTTACATCAAGCAGTGCAATCTGGCGACTCTCACATGGTCTTGGAACTCTTGGAACAGGGCCTGGATCCTTGCATCAAAGATGAAAGGGGAAGGACCCCATATATGTTGGCACATGAGAAGGAAGTGAGGAATACTTTCAGAAGATTCATGGCATCAAACCCTGAGAAATGGGATTGGCATGCTGCTAAAGTGCCTAGTGCATTGACCAAAGAAATGGAAGAATCGCAAGCAGCTAAGCAGGCTGAAAAAGATGCCAAGAGAAAAGCCAGAGCAAAAGAATTAAAAAAATTGCGTAAAGCAAAAGAAAAGAAGGCTCAGGCTGAAGCTGCCACGGCCACGAATGCTTCTAAAACTGTAGAAAACCAAATGATTGCTTCAGCTTCTACTCTTAAGGGACAATTGCAGCCCAAAAGTGGTTTGAAATTATCTAAAGAGGAGGAACTAAGAGCAGCGCAGGCTGCAGAAAGAGAGAAGAGAGCAGCTGCTGCGGAAAGAAGAATGGCAGCCCTTAAAATTCAAAGCAACAGTACAACCACTGTCGCTAGTCCTTCAGAACCTAGAAGTGGATTAGCCAGTGACATTAACTGTTCTTGTTGTAATACTTCACTTGCTGGTAAAATTCCATTCCACAGGTATAATTATAAATACTGCAGCTCATCTTGCATGCATGTACACAGGGAGATCCTAGAGGACGAGTGA 2010 0.4289 MAANLPAKSATSSTAAVSQEKRHRSIFELPPGFFNSCRLLPSLQSSVSEPLQNFDNSVLETLDPVENDINGSQNVVVSVPRWTCNTCKAQFESLQDQRLHFKSDIHRFNVKLTVAGKTILKEEDFEVLTSDSIKDFDVSSISGSEDDDDREIESQSQNDVHNKLTESFRQKLFICLQTGQRVSIWKCLVMNLTENVLYDNEKAENEVIERLKSLTLEPRNNTHLRIVLLASGGHFAGCVFDGDAVVAHKTFHRYVVRAKAGKKQSSKDASGRAAHSAGASLRRHNELALKKEIQELLTSWRTYFDASNCIFLHAASSSRQLLFDGERPYFGTQHCVVRNIPLTVRRPTLREAKRVYNQLTQVSCEADEKETLQCNQEDLMSTPISIRNGNPVTSKGDMANLDDKDKSEACSSKQDNLKPLISSASESDNEIPGISTPLHQAVQSGDSHMVLELLEQGLDPCIKDERGRTPYMLAHEKEVRNTFRRFMASNPEKWDWHAAKVPSALTKEMEESQAAKQAEKDAKRKARAKELKKLRKAKEKKAQAEAATATNASKTVENQMIASASTLKGQLQPKSGLKLSKEEELRAAQAAEREKRAAAAERRMAALKIQSNSTTTVASPSEPRSGLASDINCSCCNTSLAGKIPFHRYNYKYCSSSCMHVHREILEDE 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1064 669 MobiDBLite consensus disorder prediction 512 526 - -
Glsi07g1064 669 Gene3D - 394 497 IPR036770 -
Glsi07g1064 669 ProSiteProfiles Ankyrin repeat profile. 436 465 IPR002110 GO:0005515
Glsi07g1064 669 PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 18 668 IPR047139 -
Glsi07g1064 669 Pfam Bacteroidetes VLRF1 release factor 226 364 IPR041175 -
Glsi07g1064 669 ProSitePatterns Zinc finger C2H2 type domain signature. 84 106 IPR013087 -
Glsi07g1064 669 MobiDBLite consensus disorder prediction 507 551 - -
Glsi07g1064 669 Pfam Vms1-associating treble clef domain 631 664 IPR041540 -
Glsi07g1064 669 Coils Coil 581 610 - -
Glsi07g1064 669 ProSiteProfiles Ankyrin repeat region circular profile. 436 465 - -
Glsi07g1064 669 SUPERFAMILY beta-beta-alpha zinc fingers 73 114 IPR036236 -
Glsi07g1064 669 MobiDBLite consensus disorder prediction 139 158 - -
Glsi07g1064 669 Coils Coil 509 547 - -
Glsi07g1064 669 MobiDBLite consensus disorder prediction 398 412 - -
Glsi07g1064 669 SUPERFAMILY Ankyrin repeat 435 486 IPR036770 -
Glsi07g1064 669 MobiDBLite consensus disorder prediction 383 417 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1064 21 616 C2H2 Transcription Factor Family AT1G01930 55.082 0.0 587