Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1039 ATGCTGGAAGCTGGAAGGCCTAATGTTGGAGATTATTTCCCAGTGCTCCGTAAACTTGATCTACAAGGTGCAAGAGCAAGGATGGACCATTATTTTGAGAAGTTGCTTGGAATTTTTGATGGCATTATTGAAGAGAAACTGCGTTCAAGAGATTCAAAAACTGAGTCTGAGATCTCCAATGATGTGCTCGATTCATTCCTTAATCTCATGATAAATTCTCAGTTGACCCGCAATGAGGTGTTGCATTTATTTCTGGATTTATTTGTTGCTGGGATCGACACGAGTGCAAGCACAGTGGAATGGGTAATGACAGAGCTTATGCGCAACCCAGCAAAATTAATGAAAGCCAAACAAGAACTTGAGCAAGTCCTTGGAAAAGATGGGAACTTTGAAGAACCAAGAATCTGGGAGCTTCGTTACTTACAAGCTGTGGTGAAGGAAAGTCTGCGTTTGCACCCACCAGTTCCATTTTTGGTACCCCACATGTCAGAGAAAAGTGTACAAATTGGTGGCTTCGTAGTGCCCAAAAATGCACAGATTTGGATTAATGTATGGGGAATGGGAAGAGATTCGGAGGTTTGGAAAAACCCAGATTCATTTGAGCCTGAAAGGTTTCTGGAGAATGGAATTGATTTCAAAGGGCATGATTTTGAGCTCATCCCTTTTGGAGCAGGAAGAAGGATTTGCCCAGGATTGCCATTAGCTAATAGGATGGTGCACTTGTTGTTGGCAACTCTTCTGCACAACTTTGATTGGGCTCTTGCTAATGAAGTAAAGCCGAAAGACATAGATATGAGTGAGGAATTTGGGCTTACTTTGAAAAAGGCCCAACCTCTCCGGGTTATTCCAACAAAGCGTATCATGTAA 867 0.4233 MLEAGRPNVGDYFPVLRKLDLQGARARMDHYFEKLLGIFDGIIEEKLRSRDSKTESEISNDVLDSFLNLMINSQLTRNEVLHLFLDLFVAGIDTSASTVEWVMTELMRNPAKLMKAKQELEQVLGKDGNFEEPRIWELRYLQAVVKESLRLHPPVPFLVPHMSEKSVQIGGFVVPKNAQIWINVWGMGRDSEVWKNPDSFEPERFLENGIDFKGHDFELIPFGAGRRICPGLPLANRMVHLLLATLLHNFDWALANEVKPKDIDMSEEFGLTLKKAQPLRVIPTKRIM 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1039 288 FunFam Geraniol 8-hydroxylase 32 282 - -
Glsi07g1039 288 PRINTS P450 superfamily signature 143 154 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1039 288 PRINTS P450 superfamily signature 220 229 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1039 288 PRINTS P450 superfamily signature 229 240 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1039 288 PRINTS P450 superfamily signature 90 107 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1039 288 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 222 231 IPR017972 GO:0005506|GO:0016705
Glsi07g1039 288 Gene3D Cytochrome P450 1 286 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1039 288 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 285 - -
Glsi07g1039 288 Pfam Cytochrome P450 2 277 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1039 288 PRINTS E-class P450 group I signature 79 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1039 288 PRINTS E-class P450 group I signature 99 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1039 288 PRINTS E-class P450 group I signature 219 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1039 288 PRINTS E-class P450 group I signature 142 160 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1039 288 PRINTS E-class P450 group I signature 229 252 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1039 288 PRINTS E-class P450 group I signature 183 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1039 288 SUPERFAMILY Cytochrome P450 5 286 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1039 Glsi-ChrGlsi07 13398182 13399500 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1039 1 286 Cytochrome P450 AT2G45570 49.485 2.65e-98 296