Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1038 ATGGAGTCTCACTCTAATGATGTGCTCGATTCATTTCTGAATCTCACGAGAGATTCTCAGTTGACCCGTCACGAAGTGTTGCACTTATTTTTGGACTTATTTGCTGCTGGGATCGACTCAACTTCAAGCACAGTGGAATGGGCAATGGCAGAGCTTATGCACAACCCAGATAAATTAATAAAAACCAAACGAGAACTTGAGCAACTCCTTGGAAAAGATGGGAAATTTGAAGAATCAAGAATCTCGGAGTTTCGTTACTTACAGGCAGTGGTGAAGGAAACTCTGCGCCTGCATCCACCAGTTCCATTTCTAGTACCCCACAAGTCAGAGAACGATGTACAGATTGGTAGCTTCGTAGTGCCCAAAAATGCACAGATTCTGGTTAATGTATGGGCAATGGGACGAGATTCTGGGGTATGGAAAAACCCAAATTCATTTGAGCCTGAAAGGTTTCTGGAGGGTGAAATTGATTACAGAGGGCGTGATTTTGAGTTCATCCCTTTTGGAGCAGGAAGAAGGATGTGCCCTGGATTGCCATTAGCTAACAGGTCGGTGCACTTGTTGTTGGGAGCTCTTCTGCACAACTTTGATTGGGCTCTTCCGGATGAACAAATGCCCAAAGATATGGATATGAGTGACAAATTTGGGCTTAATCTAAAAAAGGCTCAGTCTCTTAGAGCTATTCCCACAAAGTGTATAATGTAA 705 0.434 MESHSNDVLDSFLNLTRDSQLTRHEVLHLFLDLFAAGIDSTSSTVEWAMAELMHNPDKLIKTKRELEQLLGKDGKFEESRISEFRYLQAVVKETLRLHPPVPFLVPHKSENDVQIGSFVVPKNAQILVNVWAMGRDSGVWKNPNSFEPERFLEGEIDYRGRDFEFIPFGAGRRMCPGLPLANRSVHLLLGALLHNFDWALPDEQMPKDMDMSDKFGLNLKKAQSLRAIPTKCIM 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1038 234 SUPERFAMILY Cytochrome P450 4 229 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1038 234 Gene3D Cytochrome P450 1 231 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1038 234 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 3 231 - -
Glsi07g1038 234 PRINTS E-class P450 group I signature 165 175 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1038 234 PRINTS E-class P450 group I signature 25 42 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1038 234 PRINTS E-class P450 group I signature 129 153 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1038 234 PRINTS E-class P450 group I signature 88 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1038 234 PRINTS E-class P450 group I signature 175 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1038 234 PRINTS E-class P450 group I signature 45 71 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1038 234 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 168 177 IPR017972 GO:0005506|GO:0016705
Glsi07g1038 234 Pfam Cytochrome P450 4 223 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1038 234 FunFam Geraniol 8-hydroxylase 1 228 - -
Glsi07g1038 234 PRINTS P450 superfamily signature 166 175 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1038 234 PRINTS P450 superfamily signature 36 53 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1038 234 PRINTS P450 superfamily signature 89 100 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1038 234 PRINTS P450 superfamily signature 175 186 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1038 Glsi-ChrGlsi07 13389056 13390837 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1038 7 231 Cytochrome P450 AT2G45570 54.185 1.04e-88 269