Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1029 ATGATTGCCGGGGTGGACACGACATCAAGTTCAGTAGAATGGGCAATGACAGAGCTAGTAAGTAACCCAGAGAAACTAGAAAAAGCTAGAAAAGAACTTCAACAAGTCGTAGGCAAAGACGTGAAGCTTGAAGAGTCACACATCTCAAAGTTGCCCTTCTTAAGGGCAGTGGTGAAGGAAACTCTTCGCTTGCACCCACCAGCTCCATTGCTAGTACCTCGCAAGGCACAAGTTAATGCTGAGATTTTTGGCTTCAAAGTGCCCAAAAATGCACAAATTCTAGTTAATGCTTGGGCTATGGGAAGAGATTCAAGCATTTGGTGTAACCCAAATTTATTTGTTCCTGAAAGGTTTTTGGAGAGTGAAATTGATTTTAAAGGTCGTGATTTTGAACTGATTCCCTTTGGAGCTGGCAGAAGGATGTGCCCAGGATTGCCATTGGCTTATAGAGCAGTGCACTTGATGCTGGCCTCTCTTATCCACAACCATGATTGGAAGCTTCCAGATGGCCTCCAACCAAATGAAATAGATATGGAGGAGAAATTTGGTCTAACCTTAAAAAGAGTTCACCCTCTCAAAGCTATTCCCACGAAAGCATAG 600 0.4333 MIAGVDTTSSSVEWAMTELVSNPEKLEKARKELQQVVGKDVKLEESHISKLPFLRAVVKETLRLHPPAPLLVPRKAQVNAEIFGFKVPKNAQILVNAWAMGRDSSIWCNPNLFVPERFLESEIDFKGRDFELIPFGAGRRMCPGLPLAYRAVHLMLASLIHNHDWKLPDGLQPNEIDMEEKFGLTLKRVHPLKAIPTKA 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1029 199 PRINTS E-class P450 group I signature 12 38 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1029 199 PRINTS E-class P450 group I signature 55 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1029 199 PRINTS E-class P450 group I signature 142 165 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1029 199 PRINTS E-class P450 group I signature 132 142 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1029 199 PRINTS E-class P450 group I signature 96 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1029 199 SUPERFAMILY Cytochrome P450 1 197 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1029 199 Pfam Cytochrome P450 1 185 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1029 199 Gene3D Cytochrome P450 1 195 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1029 199 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 2 198 - -
Glsi07g1029 199 PRINTS P450 superfamily signature 56 67 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1029 199 PRINTS P450 superfamily signature 3 20 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1029 199 PRINTS P450 superfamily signature 142 153 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1029 199 PRINTS P450 superfamily signature 133 142 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1029 199 FunFam Geraniol 8-hydroxylase 1 195 - -
Glsi07g1029 199 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 135 144 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1029 Glsi-ChrGlsi07 12796926 12797525 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1029 1 198 Cytochrome P450 AT1G33720 58.586 3.27e-87 259