LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi07g1028	ATGCTGAAGAAGGCAATGGCGATGGCACAGGGGACCCACTGCCATCGTGGTCCTGCTGAGCAAGGATATGGAGTTGAAAATGCGATCGTCAATGTCCCACTTTGCCCACATCCCAATCACGAGCCCAGTTTTGGGAGTGCAATTTTACTGGAAGATTCACTTGATAAGGCTCTAGGAAAGGAGCACGCTCGCCAAGTGCGAGGAAGGGATTCTAGTGTTTGGGACAATCCAAATCAATTCACGCCTGAAAGGTTTTTGGGCAGTGACATTGATTTTAAAGGCCACGATTTTGAGCTCATTCCCTTTGGATCTGGCCGAAGAATCTGCCCTGGATTGCCCTTGGCTAATAGGACTGTACACATTATGCTGGCTTCTCTTCTACTTTGCTATGATTGGAAGCTCGATGATGGATTGAAGCATGAAGACTTGGATATGAGTGAGAAGGTTGGAATTACCTTGAACAGAGCCATCCCTCTCCGAGCTATTCCTATCAAAATCTAG	501	0.4711	MLKKAMAMAQGTHCHRGPAEQGYGVENAIVNVPLCPHPNHEPSFGSAILLEDSLDKALGKEHARQVRGRDSSVWDNPNQFTPERFLGSDIDFKGHDFELIPFGSGRRICPGLPLANRTVHIMLASLLLCYDWKLDDGLKHEDLDMSEKVGITLNRAIPLRAIPIKI	166

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi07g1028	166	PRINTS	E-class P450 group IV signature	109	127	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Glsi07g1028	166	PRINTS	E-class P450 group IV signature	93	109	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Glsi07g1028	166	PRINTS	E-class P450 group IV signature	68	86	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Glsi07g1028	166	Pfam	Cytochrome P450	68	150	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Glsi07g1028	166	SUPERFAMILY	Cytochrome P450	68	163	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Glsi07g1028	166	Gene3D	Cytochrome P450	66	159	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Glsi07g1028	166	PANTHER	CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED	68	165	-	-
	Glsi07g1028	166	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	102	111	IPR017972	GO:0005506\|GO:0016705

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi07g1028	Glsi-ChrGlsi07	12715764	12724776	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi07g1028	68	165	Cytochrome P450	AT2G45550	67.347	3.33e-42	145

Showing 1 to 1 of 1 entries