Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1027 ATGAAGAGTTGTTTTGAAAAGTTGATTACGTTTTTCGATGGTCTTATAGAAGAGAGATTACGTTTAGGAGGTTCAGAAATGGAAGCCAAGCGGTGCCATGATGTGTTAGATTCTTTGATAGAGCTCATGATGGAAGAGAATTCACAAGTTAGCCGCGATCAGGTGTTGCGTTTATTTGTGGATTTATTTGTCGCTGGAGTAGATACAACGTCAAGCACAGTTGAATGGGCAATGGCAGAGTTGTTGCGAAACCCAGAAAAGTTGGAAAAGGCCAGAGAAGAGCTTCAACAAACCCTTCCCAAAGGCCACGATTTTGAGCTCATTCCCTTTGGTTCTGGTAGAAGAATCTGCCCTGGATTACCCTTGGCTAATAGGACTGTACACATTATGCTGGCTTGTCTTCTACTTTGCTATGATTGGAAGCTTGATGATGGGTTGAAGCATGATGACTTGGATATGAGTGAGAAGTTTGGAATTACCTTAAACAAAGCCATCCCTCTCCGAGCTGTTCCTATCTAA 519 0.4239 MKSCFEKLITFFDGLIEERLRLGGSEMEAKRCHDVLDSLIELMMEENSQVSRDQVLRLFVDLFVAGVDTTSSTVEWAMAELLRNPEKLEKAREELQQTLPKGHDFELIPFGSGRRICPGLPLANRTVHIMLACLLLCYDWKLDDGLKHDDLDMSEKFGITLNKAIPLRAVPI 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1027 172 Gene3D Cytochrome P450 1 101 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1027 172 Pfam Cytochrome P450 101 157 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1027 172 Pfam Cytochrome P450 2 101 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1027 172 PRINTS E-class P450 group I signature 54 71 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1027 172 PRINTS E-class P450 group I signature 107 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1027 172 PRINTS E-class P450 group I signature 117 140 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1027 172 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 101 172 - -
Glsi07g1027 172 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 110 119 IPR017972 GO:0005506|GO:0016705
Glsi07g1027 172 Coils Coil 78 98 - -
Glsi07g1027 172 SUPERFAMILY Cytochrome P450 2 170 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1027 172 Gene3D Cytochrome P450 102 168 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1027 Glsi-ChrGlsi07 12667730 12669923 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1027 76 172 Cytochrome P450 AT1G33720 51.000 4.88e-29 108