Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1021 ATGACATGTCTCGAATCCGTGTCAGTTAGCACGACAGAGACTCGAGAACATGTGATCATCACTCATACAGAGAAAGCAAAATCTAAGACCTACATTATTGCAGATGAGCAAAAACCAGAAGAGCTGGATATGAGTGAGAAGTATGGGCTTGCTATACGTAAGTTACAGCCTCTCAGGGCTATTCCTATTAAAGGGAACTCTACATTGATTAAAAAGAACTACGAAACACTTGCCTTGTCTTCTGAAATTCCAAACGAGAAGACGATACCGATGAATGATGAAAGCAAGGAATGGGAGACAAAATATTGCTGTATTTCCCATGAGTTCTTCCGAGTAGCTTCAACAAACCCTAACAAAGTTGCGGTAATCCATGCGTCCGGTGTGGCCCAGGTTTCCAGAGAACTTCGTGAAAATTCTACCTCATCCAACTTCGACGAAGACATTGTTGAGCTGTTAGACAACCGTGTGGAATCGCTCTCTCCTCCTCTGTACGCTGGGGACCGGTGCTTCACTTACTCTGATTTGTTGAAGGCCGTTCACTCCCTTAGCTCTCGCCTCCGCTCTATACTGCTTGGTGTGGATGACCCCCATTTGATCAGGCCCAAAGCTCAAGGTGATAGCGATGTCAACAGTAAAGAGAGAAGAATTGTTCAAACATCCAAGTCCTCAGAAATTGTCATGCCAAGTGCAGAAACAATGGCTGACTCAAGTAAAGAATATAGACCAAAGATAGTAGGAATATTTATGCCACCTTCTGTAGAATATATTGTTGCCGTTCTTTCTGTTTTGAGGTGTGGGGAGGCTTTCTTGCCTCTGGATCCATTTTGGCCAAACGGAAGGATACTATCGATTGTTTCTTCTTCTAAAGCTGATCTCATTATAGGGTGCCAGACTACATTTGGTAAAAGTAACTCGGACCAGCTTGATGAATCACATTGGCTAGTACAGTCAAGCAATTGTCCTCTTTTAAACTTCTCCATGGAAGAAAACCTTCAAGAGTGTCCAACAGATTTGGCATGGCCTTGTGAAATTGAAAAGCAGAGATCATTCTGTTATCTGATGTACACTTCTGGATCAACTGGAAGGCCTAAAGGAGTATGTGGCACTGAACAAGGTCTTTCAAATCGCTTATTATGGATGCAAGGAATGTATCCACAAGATGGGCAAGAATTATTGTTGTTTAAGTCATCAATTAGCTTTGTTGACCACCTGCAAGAATTTCTCAGTGCTATTTTGTCCTCTTGTGTGCTAGTTATTCCTCCTTTCTGTGAGCTGACAGACAATATATATTCTCTGATAGATTTTCTGCAGGCTTATTTTATTAATAGGCTTACGGCTGTTCCATCACTAATGAGGACAATTCTTCCTGGATTGCAAACTCATGCTGATGTACGGATTCAAAGTTCATTGAAATTGCTTGTGCTGAGTGGTGAAATTTTGCCATTAACCTTATGGGAGATGCTTTCTACTGTGTTACCAAAGACAGCAATCTTGAACTTATATGGAAGTACTGAGGTCTCTGGTGATTGTACATATTTTGATTGCAAGAGGATGCCTTCGATTTTGAAGTCAGAGATGCTAATTAGTGTGCCAATAGGTTTGCCTATTTCCAACTGTGATGTGCTGCTTCTTGGTGACAGTGGTGCATCCAATGAGGGAGAGCTATATGTTGGTGGTTCATGCATTTCTCAGGGCTACCATACTGAGTCCAATTTAACGTCTAATGACTTTGTGAAATTGCCTCAAAGCTATAGTTGCAGTGGTTCTGTTGATTCTTGCCAGAGCCAGTTATACTTCAGAACTGGTGATTTAGCCAAACAGTTACCAAGTGGTGACTTTATATTTTTGGGAAGAAAGGACCGCATTATAAAAGTCAATGGACAACGTATTGCTCTGGAAGAAATTGAAAATTTACTAAGGGAACACCCAGATATAAATGATGCTGCTGTAATATGTCGAAATAATCAAGGAGAACTTGCACTTCTGGAAGCATTTATAATATTAAAAGATGAAGAAAGACCTGGTGAATTATTAATACCGTCAATCAGAAGTTGGATGATTAACAACCTTCCATCAGTTGTGGTTCCTAATCGATTCATCTTTACAGAATCATTTCCTCTGTCTTCTAGTGGTAAAGTTAATTATGAGTTGTTGGCAGGTTCAACTTTATTCACTAAGCATGTTGAGGATAAGGTTGGTAACATAGGATGCAGTAATCTTCTACAACTTATCAAGAAGGCCTTTCGTGATGCTTTAATGGTAGAAGATGTTTGCAAGGATGATGACTTCTTTAGGACGGGTGGGAACTCTCTCGCTGCTGCACATGTTGCTCACAATTTGGGGATTGATATGAGATTTTTTTATTACTATCCAAGTCCTTTTAAGCTATGTATGGCTCTTCTACAGAAAAGGGGATCTTGTTCTTTGCATAACAACCTGGATACCTGTTCAAAAGTAAATGTAGACAGACAAAGTAACCTATTTTCACCCAATCATTCTGAAAATATTAATCCTCTTCTCCTTGAACCAAGGAGGATTTCTGAAGGCGATGGCAATAATTCTTTTCCTTCTAAACGCTGGAAGAGGGATCTTACTACTGACATAACATCAGGGGGTGATGGATCTTTCCCATGGTGTTCTTCCTCAATGTTTTCATCATGCTCATTTAGCCGATGCAACAAGGTGTTGTGTAAAGGGCAGCCTGGAGTGATGGTTACACATCAAAGAACTTGGTCTATTAAAGTTCCAAGAATTAGAAGAGGCTCTCTGAAAGAATTTTGGAAAATTTATATGGAATCATGTGTTGATGCATCACCAATGCTCGTGTTTAAAAGCTCAGATATTTACTTGTTCATTGGATCTCACTCATATAAATTTCTCTGTATAAATGCCAGAAGTGGTTCTGTTCAGTGGGAAATCAAACTAGAAGGACGAGTTGAATGTACAGCAGCAATTGTTTCTGATTTTTCCCAGGTTGTTGTTGGATGTTATAGGGGAAAAATATATTTTCTTGATTTTTCAAATGGAAACATTTGTTGGAGTTTTCAAACATCTGGAGAGGTAAAATCTCAACCAGTTGTAGACACAAGCAGACATCTGATCTGGTGTGGCTCACATGATCATAACTTATATGCTCTTGATTACAAAAATCATTGCTGTGTCTATAAGCTACCATGTGGAGGCAGTATATATGGGTCACCTGCAATTGATGAGGTTCGTGGTGTGCTTTATGTGGCTTCTACTGGTGGTCGTGTTACAGCTATATCAATAAGGGATTTTCCATTTAATATTTTGTGGCTCCACGAGTTAGAAGTCCCAGTTTTTGGTTCTCTGGCTGTTACTCAGAATGGAATTGTTATATGTTGCTTGGTAGATGGTCATGTTCTTGCATTGGATCCAGATGGATCCATACTTTGGAAGAAAATAACTAATGGCCCAATATTTGCTGGAGCGTGCATATCTTCTGCTCTTCCATCTGAGGTACTTATATGCTCCAGAAATGGAAGCGTGTATTCATTTAAACAGGAGAAGGGGGATCTACTGTGGGAATACAATGTTGGAGATCCAATTACTGCATCTGCTTATGTTGACGAGCACTTGCAGCTAGAGTCTGATACCTCCAATTATTCGGACAGATTAATTTGCATCTGTTCGAGTTCTGGAGGCATACACATTCTTCGAGTGAGCTTGAATGTCACTGAAGATGCAAATCCACAAACTGATGTGCAGGAATTTGCTAGGCTAAACTTGCAGGGAGATATTTTCTCTTCACCCTTAATGATTGGTGGCAGGATTTTTGTTGGTTGTAGGGATGATTACGTGCACTGCCTTGCCCTTGAATTTGAAAGTTGA 3852 0.4013 MTCLESVSVSTTETREHVIITHTEKAKSKTYIIADEQKPEELDMSEKYGLAIRKLQPLRAIPIKGNSTLIKKNYETLALSSEIPNEKTIPMNDESKEWETKYCCISHEFFRVASTNPNKVAVIHASGVAQVSRELRENSTSSNFDEDIVELLDNRVESLSPPLYAGDRCFTYSDLLKAVHSLSSRLRSILLGVDDPHLIRPKAQGDSDVNSKERRIVQTSKSSEIVMPSAETMADSSKEYRPKIVGIFMPPSVEYIVAVLSVLRCGEAFLPLDPFWPNGRILSIVSSSKADLIIGCQTTFGKSNSDQLDESHWLVQSSNCPLLNFSMEENLQECPTDLAWPCEIEKQRSFCYLMYTSGSTGRPKGVCGTEQGLSNRLLWMQGMYPQDGQELLLFKSSISFVDHLQEFLSAILSSCVLVIPPFCELTDNIYSLIDFLQAYFINRLTAVPSLMRTILPGLQTHADVRIQSSLKLLVLSGEILPLTLWEMLSTVLPKTAILNLYGSTEVSGDCTYFDCKRMPSILKSEMLISVPIGLPISNCDVLLLGDSGASNEGELYVGGSCISQGYHTESNLTSNDFVKLPQSYSCSGSVDSCQSQLYFRTGDLAKQLPSGDFIFLGRKDRIIKVNGQRIALEEIENLLREHPDINDAAVICRNNQGELALLEAFIILKDEERPGELLIPSIRSWMINNLPSVVVPNRFIFTESFPLSSSGKVNYELLAGSTLFTKHVEDKVGNIGCSNLLQLIKKAFRDALMVEDVCKDDDFFRTGGNSLAAAHVAHNLGIDMRFFYYYPSPFKLCMALLQKRGSCSLHNNLDTCSKVNVDRQSNLFSPNHSENINPLLLEPRRISEGDGNNSFPSKRWKRDLTTDITSGGDGSFPWCSSSMFSSCSFSRCNKVLCKGQPGVMVTHQRTWSIKVPRIRRGSLKEFWKIYMESCVDASPMLVFKSSDIYLFIGSHSYKFLCINARSGSVQWEIKLEGRVECTAAIVSDFSQVVVGCYRGKIYFLDFSNGNICWSFQTSGEVKSQPVVDTSRHLIWCGSHDHNLYALDYKNHCCVYKLPCGGSIYGSPAIDEVRGVLYVASTGGRVTAISIRDFPFNILWLHELEVPVFGSLAVTQNGIVICCLVDGHVLALDPDGSILWKKITNGPIFAGACISSALPSEVLICSRNGSVYSFKQEKGDLLWEYNVGDPITASAYVDEHLQLESDTSNYSDRLICICSSSGGIHILRVSLNVTEDANPQTDVQEFARLNLQGDIFSSPLMIGGRIFVGCRDDYVHCLALEFES 1283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1021 1283 SMART ire1_9 983 1016 IPR018391 -
Glsi07g1021 1283 SMART ire1_9 1111 1142 IPR018391 -
Glsi07g1021 1283 SMART ire1_9 942 974 IPR018391 -
Glsi07g1021 1283 SMART ire1_9 1155 1185 IPR018391 -
Glsi07g1021 1283 SUPERFAMILY Acetyl-CoA synthetase-like 98 718 - -
Glsi07g1021 1283 Gene3D - 738 796 IPR036736 -
Glsi07g1021 1283 Gene3D - 900 1093 IPR015943 GO:0005515
Glsi07g1021 1283 Gene3D - 1094 1280 IPR015943 GO:0005515
Glsi07g1021 1283 Pfam PQQ-like domain 1073 1236 IPR002372 -
Glsi07g1021 1283 FunFam Putative acyl-activating enzyme 19 1093 1280 - -
Glsi07g1021 1283 Gene3D - 212 619 IPR042099 -
Glsi07g1021 1283 FunFam Putative acyl-activating enzyme 19 913 1092 - -
Glsi07g1021 1283 Gene3D - 620 727 IPR045851 -
Glsi07g1021 1283 PANTHER BETA-ALANINE-ACTIVATING ENZYME 101 1280 - -
Glsi07g1021 1283 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 921 1277 IPR011047 -
Glsi07g1021 1283 SUPERFAMILY ACP-like 739 797 IPR036736 -
Glsi07g1021 1283 Pfam AMP-binding enzyme C-terminal domain 634 712 IPR025110 -
Glsi07g1021 1283 Pfam PQQ enzyme repeat 992 1026 IPR002372 -
Glsi07g1021 1283 Pfam AMP-binding enzyme 244 625 IPR000873 -
Glsi07g1021 1283 ProSitePatterns Putative AMP-binding domain signature. 353 364 IPR020845 -
Glsi07g1021 1283 CDD A_NRPS 241 718 - -
Glsi07g1021 1283 ProSitePatterns Phosphopantetheine attachment site. 765 780 IPR006162 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1021 Glsi-ChrGlsi07 12175907 12201250 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1021 287 718 Acyl Lipid Metabolism Gene Families AT5G36880 20.909 1.49e-13 73.6