Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1019 ATGGCGCCGCCTTTTGCGGCTAACCTCGCCGTCTTCGCCCTCCTCGTCTCCGCCACAGCAGCTGCAACCGTGTACACCAACCACACCGTTGGTGGCGCTGCCGGATGGTTCTTTAACGCCACCACCAGCACTTCCGCCGCTAACTACTCTGCTTGGGCCGGTAGCCAAACCTTCAACCTCGGCGATTATCTCATTTTCAACACCAATTCGAACCAGACCGTGATTCAGACGTACAATGTCACCACCTTCCAGAGCTGCACCGCCGATGAGTCCGATAACGGCACCTTCCAGTACGACGGCGGAACGACTCGTTTTGGCGAGGCGTTGACCATTCCCGTTCCGTTGACCATAGAGGGTCCGAACTACTACTTCTCCGACACCAGCGACGGTGTCCAGTGCCAACACGGCTTGGCCTTCGAGATCAATGTCAAGCACGGACTAGGCTTGCCGCCGACCCTCAACCAGCCGCCGCCGCCACCGTACATTGAGCCGCCGGGTCCTGATACGGCAGATTCTCCGCCGATCACGATAGCACAGCCCCCAAACGACGCATTCACTGCCCGTGCTAACGTGCGCCTGGCGTTTTACGGTTTTGCTGCGGCTCTGCTATTCTTCCATTTCCAGTGA 627 0.5853 MAPPFAANLAVFALLVSATAAATVYTNHTVGGAAGWFFNATTSTSAANYSAWAGSQTFNLGDYLIFNTNSNQTVIQTYNVTTFQSCTADESDNGTFQYDGGTTRFGEALTIPVPLTIEGPNYYFSDTSDGVQCQHGLAFEINVKHGLGLPPTLNQPPPPPYIEPPGPDTADSPPITIAQPPNDAFTARANVRLAFYGFAAALLFFHFQ 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1019 208 Pfam Plastocyanin-like domain 41 136 IPR003245 GO:0009055
Glsi07g1019 208 MobiDBLite consensus disorder prediction 149 172 - -
Glsi07g1019 208 FunFam Early nodulin-like protein 18 25 146 - -
Glsi07g1019 208 PANTHER BLUE COPPER PROTEIN 23 156 IPR039391 GO:0009055
Glsi07g1019 208 MobiDBLite consensus disorder prediction 151 171 - -
Glsi07g1019 208 Gene3D - 24 145 IPR008972 -
Glsi07g1019 208 ProSiteProfiles Phytocyanin domain profile. 26 145 IPR003245 GO:0009055
Glsi07g1019 208 SUPERFAMILY Cupredoxins 26 143 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1019 Glsi-ChrGlsi07 12156259 12157196 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1019 1 167 Phytocyanin Superfamily AT1G08500 38.764 1.99e-34 120