Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0990 ATGGCTTATCAAGCACTGAATACTGCTAAAACTCTTGAACGGTACCAACGGTGCTCTTTTACTCCTCAAGACAACTACGTTGAGCTTCAAACTCAGAGCTGGTACCAAGAGGTGTCAAAGCTAAAGGCAAAGTATGAGTCTCTCCAACAGACTCAGAGGCATTTTCTTGGGGAAGATCTTGGAACGTTGAGTGTGAAAGAGCTGCAAAATCTTGAGAAGCAGCTTGAAGGAGCCTTAGCTCAAGCTAGACAAAGGAAGGCGAGTACACATCCAAAAACACAGATTATGATTGAACAAATGGATGATCTTCGCAGAAAGGAACGTCATCTTGGAGACATTAATAAGCAACTTAGACTCAAGCTCGAAACAGAGGGCTTTAATCTTAAAGCTGGAGAAAACTTGTGGGGCTCTTGTTCAACAGCAGGAAATAGCACTTTTCCCATGCAGCCTTCTCAAATCAACCCTATGGAGTTCCAAGGAGAACCTTTCTTGCAAATAGGGTACCATCACTATGCTGAAGCTGAGACGTCTAGTGTTCAAAGGAGCATGGGTGGTGAGACAAACTTCATCCAAGGATGGGTACTTTAA 588 0.4354 MAYQALNTAKTLERYQRCSFTPQDNYVELQTQSWYQEVSKLKAKYESLQQTQRHFLGEDLGTLSVKELQNLEKQLEGALAQARQRKASTHPKTQIMIEQMDDLRRKERHLGDINKQLRLKLETEGFNLKAGENLWGSCSTAGNSTFPMQPSQINPMEFQGEPFLQIGYHHYAEAETSSVQRSMGGETNFIQGWVL 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0990 195 Coils Coil 65 88 - -
Glsi07g0990 195 Pfam K-box region 30 121 IPR002487 GO:0003700|GO:0005634|GO:0006355
Glsi07g0990 195 ProSiteProfiles K-box domain profile. 31 127 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0990 Glsi-ChrGlsi07 11458373 11463139 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0990 3 195 MADS-box Gene Family AT2G45650 53.465 1.92e-66 202