Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0972 ATGGATAATTATGGATCTTCATCCCCATACCGTTATCCAAACCCATACGAATACCAGAGTAATCCTCCTCCTCCTTACCCACCTCCAGGTTCAGATCCAGTTGCACGTCCTCCTTACCCTTATCCATTCACTCCATCACTTTCCTTTAACAGTTCCTACCCCCCGCCTCCTAGATCATCCTTCTCAGGCCCCCATTCTGGCCCCTTAGACTATAGCTATCACCCTCCACCATCAGCCTTCGGCCATCATCCTCCACCATCAGCCTTCGGCCATCACCCTCCTCCATCAGACTATAGCTATCCCCCTCCACCAGCAGACTATAGCCATCGCCCACCACCAGCAGACTATACCCATCCCCCTCCACCAGCAGACTATAGCCATCGCCCACCACCAGCAGACTATACCCATCCCCCTCCACCAGCAGACTATACCCATCCCCCTCCACCATCCTATTATCCTTACCCTTACCAAGTTCCTTCGGGGAATCATAGTCCTCCTCAGCCTGCCCACCTTAATAGTTTCCATTATGGATCATCTCCTCCCCATTCCCAACAAACTGAGGCGGACTCATTTCCTGAAAACCGACCTATGGTCCATTCACGTGCCAATAGCTTTTCTCAGCCCTACCAACACGAGAGCACCGGCGCTGCTGGAGATACATCAGTGCAAACTAATGATGATTTCAAGAATTCTCGGATTGCTTCATACCCACCTCTGGACGATCTTATGAGCAATGTTAGGTTGTCTGATAACCTGCAAACTACTTCTGCATCGCCCCCTGCACCTGTAGTGCAGCCACTAATGCATTCCCTTTCAGTTCCAAAGAAAGATAAGCAAGAGGATATTTATGGTTTGCCTAATAAAAGCTTCTCAGGGTGGGGATCCTCCAACTCTGGTCGGTCGGATACATCCAAACTTTCAGCTAATTCAGGCTCATTTAATGACTCAGTGCATAGTCAGAGTATGCAGATTGTTCCATTACAGTATAAAGGGTCGTTGAAAGTTTTACTCCTACATGGAAATTTAGATATATGGATTCATGGAGCCAAAAAGCTTCCAAATATGGACATGTTCCACAAAACTTTGGGGGATATGTTTACTAAATTACCTGGGAATATGAACAACAAAATTGAAGGAACTATGAGTAAGAATATTACTAGTGATCCTTATGTAACAATTTCGGTATCAAATGCTGTAATTGGGAGGACTTTTGTGATTAGCAACAGTGAAAATCCTGTTTGGAAGCAACATTTCCATGTTCCTGTTGCACATTATGCGGCTGAAGTGCACTTTGTTGTCAAAGACAGTGATGTTGTAGGTTCACAGCTCATTGGCATTGTGGCAATTCCTGTGGAACAGATATACTCAGGGGAAAAAATAGAGGGGACTTACCCTATTCTGAATAATAGTGGGAAGCCTTGCAAGCAAGGTGCTGTATTGAGCTTATCGATTCAGTACATCCCAATTGAAAGACTGAGCATTTATCATCAAGGAGTTGGAGCAGGGCCTGACTACACAGGGGTTCCTGGCACATACTTTCCTCTGAGGAAAGGTGGAAATGTTACTCTATATCAAGATGCCGATGTTCCAGATGGCTGCCTCCCCAACGTGATGCTTGACCAAGGGATGAATTATGTGCATGGAAAATGTTGGCATGACATCTTTGATGCCATACGTCAAGCTCGGCGTTTGATTTATATTACAGGATGGTCAGTATGGCACAAAGTTAAGTTGGTAAGGGATGCCGGTAATCCAGCAGGTTACACCCTGGGTGATCTTCTGAGGTCAAAATCACAGGAAGGAGTAAGAGTGCTTCTTCTTATTTGGGATGACCCCACGTCAAGGAACATTTTAGGTTATAAAACAGATGGTGTCATGGCAACTCATGATGAGGAAACTCGAAGATTTTTCAAACACTCTTCTGTGCAAGTGCTGCTTTGTCCACGCATTGCTGGAAAACGACATAGCTGGTACAAGCAAAAGGAAGTTAGTACTATATATACGCATCATCAGAAAACTGTAATTGTGGATGCTGATGCTGGATATAATAGAAGAAAAATTGTAGCATTTGTTGGTGGACTTGATTTGTGTGATGGGCGATATGATAATCCCCACCATTCTCTCTTTAGGACACTCCAGACACTGCATAAGGACGACTATCACAACCCTACTTTCACAGGTAATGTTGGTGGTTGTCCACGGGAACCATGGCACGACTTGCATTCTAAAATTGATGGTCCTGCAGCATATGATGTTCTGACCAACTTTGAGGAGCGCTGGTTAAAAGCTTCAAAACCTCATGGGATAAAAAAGTTGAAAGTTTCATATGATGATGCTTTGCTTAGGCTGGAAAGAGTTCCAGACATTATCGGCATGTCTGATTCTCTTGGTGTTAATGAGAATGGTCCTGAAGCTTGGCATGTTCAAATATTTCGTTCAATTGATTCAAATTCTGTTAAGGGATTTCCAAAGGATCCCAAAGATGCACCAAGCAAGAACTTGGTATGTGGGAAGAATGTGCTAATTGACATGAGCATACATACCGCATATGTGAAGGCCATTCGTGCTGCACAGCATTATATATATATAGAGAATCAATATTTCATTGGGTCTTCATACAATTGGAGTCAACATAAAGACCTTGGTGCTAATAATTTGATTCCAATGGAAATCGCCCTAAAGATTGCTGAAAAGATAAGGGCAAACGAGAGATTTGCTGTGTATATTGTTATTCCAATGTGGCCTGAGGGTGTTCCAACAGGGGCTGCCACACAAAGGATTCTGTTTTGGCAGCATAAAACAATGCAAATGATGTATGAGACAATTTACAAGGCTTTGGTTGAGACTGGGCTTGAAGAGGCATATTCTCCAGAAGACTATTTGAACTTCTTCTGTCTTGGCAATCGGGAGGTCACTGATATGTATGACAATAGTGCAAAATCTGGAGCTCCTCCTCCAGCAAATAGTCCACAGGCACTTAGTCTAAGTAGCCGACGTTTCATGATTTATGTTCATTCAAAAGGAATGATAGTTGATGATGAATATGTTATATTGGGGTCTGCAAACATCAACCAGCGGTCTATGGAAGGAACAAGGGACACTGAGATTGCAATGGGAGCCTACCAACCTCAGCATACCTGGGCAAGAAGACTTTCTTATCCTCTTGGACAGATCCATGGATATAGGATGTCACTTTGGGCAGAACATACAGGAAGAATTGAAAACTGCTTCTTGCAACCTGAGAGCCTTGAATGTGTAAGAACGGTTAGAACAATGGGTGAATTCAACTGGAGACAATTTGCGGCAAAAGACGTGACAGAGCTGAGAGGGCACCTACTCAAATATCCGGTTAAAGTTGACAGAACAGGGAAGGTTACATCCCTTCCCGGCCATGAAGACTTCCCTGACGTGGGAGGGAAAATAATTGGATCATTTATTGCCATTCAGGAGAATCTAACCATTTGA 3465 0.4381 MDNYGSSSPYRYPNPYEYQSNPPPPYPPPGSDPVARPPYPYPFTPSLSFNSSYPPPPRSSFSGPHSGPLDYSYHPPPSAFGHHPPPSAFGHHPPPSDYSYPPPPADYSHRPPPADYTHPPPPADYSHRPPPADYTHPPPPADYTHPPPPSYYPYPYQVPSGNHSPPQPAHLNSFHYGSSPPHSQQTEADSFPENRPMVHSRANSFSQPYQHESTGAAGDTSVQTNDDFKNSRIASYPPLDDLMSNVRLSDNLQTTSASPPAPVVQPLMHSLSVPKKDKQEDIYGLPNKSFSGWGSSNSGRSDTSKLSANSGSFNDSVHSQSMQIVPLQYKGSLKVLLLHGNLDIWIHGAKKLPNMDMFHKTLGDMFTKLPGNMNNKIEGTMSKNITSDPYVTISVSNAVIGRTFVISNSENPVWKQHFHVPVAHYAAEVHFVVKDSDVVGSQLIGIVAIPVEQIYSGEKIEGTYPILNNSGKPCKQGAVLSLSIQYIPIERLSIYHQGVGAGPDYTGVPGTYFPLRKGGNVTLYQDADVPDGCLPNVMLDQGMNYVHGKCWHDIFDAIRQARRLIYITGWSVWHKVKLVRDAGNPAGYTLGDLLRSKSQEGVRVLLLIWDDPTSRNILGYKTDGVMATHDEETRRFFKHSSVQVLLCPRIAGKRHSWYKQKEVSTIYTHHQKTVIVDADAGYNRRKIVAFVGGLDLCDGRYDNPHHSLFRTLQTLHKDDYHNPTFTGNVGGCPREPWHDLHSKIDGPAAYDVLTNFEERWLKASKPHGIKKLKVSYDDALLRLERVPDIIGMSDSLGVNENGPEAWHVQIFRSIDSNSVKGFPKDPKDAPSKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSQHKDLGANNLIPMEIALKIAEKIRANERFAVYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVETGLEEAYSPEDYLNFFCLGNREVTDMYDNSAKSGAPPPANSPQALSLSSRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPQHTWARRLSYPLGQIHGYRMSLWAEHTGRIENCFLQPESLECVRTVRTMGEFNWRQFAAKDVTELRGHLLKYPVKVDRTGKVTSLPGHEDFPDVGGKIIGSFIAIQENLTI 1154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0972 1154 MobiDBLite consensus disorder prediction 1 15 - -
Glsi07g0972 1154 MobiDBLite consensus disorder prediction 289 312 - -
Glsi07g0972 1154 Gene3D Endonuclease Chain A 817 1052 - -
Glsi07g0972 1154 FunFam Phospholipase D delta 541 779 - -
Glsi07g0972 1154 PANTHER PHOSPHOLIPASE D 332 1144 IPR015679 -
Glsi07g0972 1154 MobiDBLite consensus disorder prediction 284 312 - -
Glsi07g0972 1154 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 338 488 IPR035892 -
Glsi07g0972 1154 SMART pld_4 1000 1027 IPR001736 GO:0003824
Glsi07g0972 1154 SMART pld_4 665 700 IPR001736 GO:0003824
Glsi07g0972 1154 SMART C2_3c 341 463 IPR000008 -
Glsi07g0972 1154 Pfam Phospholipase D C terminal 1074 1144 IPR024632 -
Glsi07g0972 1154 MobiDBLite consensus disorder prediction 163 231 - -
Glsi07g0972 1154 Pfam C2 domain 340 466 IPR000008 -
Glsi07g0972 1154 SUPERFAMILY Phospholipase D/nuclease 514 764 - -
Glsi07g0972 1154 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 1000 1027 IPR001736 GO:0003824
Glsi07g0972 1154 Pfam Phospholipase D Active site motif 1001 1027 IPR001736 GO:0003824
Glsi07g0972 1154 Pfam Phospholipase D Active site motif 666 700 IPR001736 GO:0003824
Glsi07g0972 1154 SUPERFAMILY Phospholipase D/nuclease 827 1086 - -
Glsi07g0972 1154 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 665 700 IPR001736 GO:0003824
Glsi07g0972 1154 Gene3D C2 domain 335 479 IPR035892 -
Glsi07g0972 1154 CDD C2_plant_PLD 334 487 - -
Glsi07g0972 1154 ProSiteProfiles C2 domain profile. 319 464 IPR000008 -
Glsi07g0972 1154 FunFam Phospholipase D delta 335 482 - -
Glsi07g0972 1154 Gene3D Endonuclease Chain A 542 780 - -
Glsi07g0972 1154 FunFam Phospholipase D 813 1046 - -
Glsi07g0972 1154 MobiDBLite consensus disorder prediction 1 242 - -
Glsi07g0972 1154 MobiDBLite consensus disorder prediction 16 62 - -
Glsi07g0972 1154 MobiDBLite consensus disorder prediction 78 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0972 Glsi-ChrGlsi07 9969904 9980675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0972 122 1154 Phospholipase D Gene Family (Wang group) AT2G42010 70.085 0.0 1471
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g0972 07 9969904 9980675 Glsi07g0972 07 9969904 9980675 ECH