Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0948 ATGAACCCCACCTGCTTAAACTCCTGTACTAGGAACTTTACTTACTCGATCACTCTAGCGTCAGTCCCTTTTGATGAAGCATGGTTGCCCCAGTGTCCGTTACTGGGCTGGGCTCAGGAAAGTCCCCGGGCCTTTAACTGCAGAGATGCAGCCTCTGAAACGAGTGCTCTTCGAGTTAGGGAATTGTCTCACCCTTCGAGAAATGGGTCCGTTCTCAGTGATTTCCCAGCCATCAGAGCTTTGGAGAAGAAGGTGAAGGAATGGTGGCATAAACCGGTTATCCACACCGGGTCTAGTCTCAATAACAAGAAACATTTGGAAGACTTAAGAGCAATGAAGAGATTGCAGGAGCCAATGGAAAAAGAGAAGAAAAAAGGAGGATCCCTGAAGGCGGAGTGCTTTGAGAGGGTTTTGCCGTCTTGGCGTCGCTTCTTGCCTACTGATGAAGAATTGATTATGAAATACTTGATCAAAAAAGTGATGGGAGAAAAGTTGCCTGCTCCTAAAATTCATGAGGAAGATCTCTACAACAGTTGCCCCGAAGAACTCATTGGAAAACATAAATTATATAAAGAAGAAGAGTGGTATTTTTTCTGTTCAAGAAATCGAGAGTATCCAAAAGACAAGCGTCCGGGGTTTTGGAGATCAACTGGGAGTGCGAAAAATATAGAACATGCAGGAAATGTAATTGGCATCAGAACAACTTTGGACTACAAATTGGGGACACCCAAGAAATCCAGAGATACAGAATGGAAAATGCATGAGTTTGTTCTCAAAGATGGCGGCATTCTTCCTGGAGACATAAAGGGCAAAGACAAGTTAACCAAGTGGGTTCTCTGCAAGATTTACAAGAAGAAAAAGAGTGAGAGTAATGATGATGACGTGAAGGTAGAGGGTAGGGAAGAAGGGCTGAAAGTTCAGGCTGCAAATTTGCAGCATAACAACGATGGCTTCGCACACTCTGGTCCATTGGTTGAATCGAGGATAGATGTTCATGGTGTTTCTACCTTTGCCTTCTCAAGAACAGCAACTTACAGAAACGCTAACCATGTTATCATACACAGTAACAACCCTATCTCTTTAGCATATGATCAACCTATGATGCCCGGATCTGGAACTCTTCATCAAGTCCCTGCTCCATCTGTTATGAGTGCACCACCACCAGTTAGCTACCAGAAGGAGATTCAGCATCTTGGTCCATTGGTAATAGATATTGATGGTGGTTCTACCTCTACCTTCTCAAAAACAGCGACTTCCGGAAACCCTAACCCTGCTATTATATACAATAACGAGCCTCTCTCGTTGGCATGTGATCACCCAATGATGCCCAGATCTAGAATTCCTCATCAAGCCCCTCCTCCATATGATAGGAGTGCTACACCAGTTAGCTACCAGAATGGGGTTCAGCAATTTGGTCCATTGGTTGTAGATATTGATGGTGGTTCTACCTCTACCTTCTCAAAAACAGCGACTTCCAGAAACCCTAAGCCTGATATTATATACAATAACGGACCTCTCTCTTTAGCATGTAATCACCCAATGATACCCAGATCTAGAATGCCTCATCAAGTCCCTCCTCCATATGACAGGAGTGCAACACCAGTTAGCTACCAGAATGGGATTCAGCAACTTGGTTCATTGGTTGTAGATATTGATGGTGGTTCTACCTCTACCTTCTCAAAAATAGCGACTTCCAGAAACCCTAATCCTGGTATTATATACAATAACAAGCCCCTCTCTTTAGCGTGTAATCACCCACTGATGCCCAGATCTAGAATTCCTCATCAAGTGCCTCCACCACATGTTAGGAGTGCAACACAAGTTAGCTACCTGCAGAATGGGGTTCAACCACCTGGTGAAAATGGTTTCCATGACAAGAAGGAGGATGAAGATTTTGAAGATTTTTGTAATAATCTGGAAAATGTTGTAAATTTAGAAACGTTATCTTTTCTCAAGGGACAAAATAAGCAGTTTTAG 1977 0.433 MNPTCLNSCTRNFTYSITLASVPFDEAWLPQCPLLGWAQESPRAFNCRDAASETSALRVRELSHPSRNGSVLSDFPAIRALEKKVKEWWHKPVIHTGSSLNNKKHLEDLRAMKRLQEPMEKEKKKGGSLKAECFERVLPSWRRFLPTDEELIMKYLIKKVMGEKLPAPKIHEEDLYNSCPEELIGKHKLYKEEEWYFFCSRNREYPKDKRPGFWRSTGSAKNIEHAGNVIGIRTTLDYKLGTPKKSRDTEWKMHEFVLKDGGILPGDIKGKDKLTKWVLCKIYKKKKSESNDDDVKVEGREEGLKVQAANLQHNNDGFAHSGPLVESRIDVHGVSTFAFSRTATYRNANHVIIHSNNPISLAYDQPMMPGSGTLHQVPAPSVMSAPPPVSYQKEIQHLGPLVIDIDGGSTSTFSKTATSGNPNPAIIYNNEPLSLACDHPMMPRSRIPHQAPPPYDRSATPVSYQNGVQQFGPLVVDIDGGSTSTFSKTATSRNPKPDIIYNNGPLSLACNHPMIPRSRMPHQVPPPYDRSATPVSYQNGIQQLGSLVVDIDGGSTSTFSKIATSRNPNPGIIYNNKPLSLACNHPLMPRSRIPHQVPPPHVRSATQVSYLQNGVQPPGENGFHDKKEDEDFEDFCNNLENVVNLETLSFLKGQNKQF 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0948 658 ProSiteProfiles NAC domain profile. 138 285 IPR003441 GO:0003677|GO:0006355
Glsi07g0948 658 Gene3D NAC domain 147 290 IPR036093 GO:0003677|GO:0006355
Glsi07g0948 658 PANTHER NAC TRANSCRIPTION FACTOR 56 138 307 - -
Glsi07g0948 658 Pfam No apical meristem (NAM) protein 143 258 IPR003441 GO:0003677|GO:0006355
Glsi07g0948 658 SUPERFAMILY NAC domain 138 285 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0948 Glsi-ChrGlsi07 9470479 9477844 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0948 138 301 NAC Transcription Factor Family AT3G15500 40.698 5.66e-31 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi07g0948 NAM 3.8e-24 No_clan