Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0907 ATGGATATAGCTTGTGGCTTACCGCAGTCAAGAGTGTTACATGGAGATGGAGGGGTGGGTTACAAAAAAAGATCAATGGATCGTTTTGATTCTTGCATTATGCTCAGAAGGAGAGGTTCTGGGTGTGCGTTTCTTGGCAACTCAAGTAGTATTTTGAAAGCACGTTTTAGTGGGATGAATAAAATTAGTGGTATCACTGCTTGTCGGAATCCAAGATTGATTTCTGTGGGAGAGTTTAAAGTTTCAAATATGAAGAAAACTTGGTCTAGTAAGAATAATAATATTTTTATGGGGTCAAGAGCAATATGGTTGAAGTGCCAGGGTAATGATTCTTTAGCATATGTCAATGGCAATGGTCGTAATGTAGATTATGGGGAAGGTCCAGGTGAGGAATTGGGATTGGGGCCCACTTCTAGTGTTGAATTGACTCCATCGTTGGAAGAAGAAAAAGAGGGGGGACAAGGAGGGAGGAAAGAAGGAGAAGTAGAGGCTCAAAATTTGGATGAACTGAAAGAACTATTACAAAAGGCCTTGAAAGAATTAGAAGTTTCTAGAGTAAATAGTACTTTGTTTGAGGAAAAGGTAAAAAAAATTTCAGAGACTGCAATATCATTGCAGGATGAAGCAACAAATGCTTTGAACGATGTCAATTCTACCCTTGATGCAATCCAAGAAATTGTGAATGAAGAATGTATTGCCAAAGAAGCTGTTCAAAAAGCAACAATGACTCTTTCATTAGCTGAGGCGAGGCTTCAAGTGGCTGTAGAATCTATAGAGGTTGCAAAAGAAGAGCATGATTCCCCTCAAGGTTCAAATGAGAGTGATGGGGATAACGACGTAACCGAAGAGGAGGAAGCACTTTTGGCTGCTCAGGAAGATGTTCAGGAATGTCAGACAAATTTAGCAAATTGTGAGGCAGCATTGAGATGCTTGCAAAATAAAAAGGAGGAGTTGCAGAAGGAAGTGGAAAAGTTGAATGAAATTGCAGAAAAGGCACAATTGAATGCATTGAAAGCAGAGGAGGATGTTACAAACATAATGCTTTTAGCAGAGCAAGCTGTTGCCTTTGAACTTGAGGCTGCACAACGGGTGAATGAGGCAGAGATTGCCTTACAGCGAGCAGACAAGTCTATCGCCAGTTCTAATGTTGATATTATAGAAACAATACAAGTACAAGATGCTGAGAGTGTTTCTGAGGAGGAGAAAGTGGTTGAAGGATTTTCTGGTGACTTTACTGTTGAAGAGGATGGAAATTTGCCAATTGATGATGAATCTTTGCTTCCCCAGCGATCACCAGTAACACCATCTGATAAAACGAGCCAAATTTTGGTGGACTTGACTCAGTCTGATTATCTGAGTGATCATGAGAATGGAAGATTAGACTCTTCTACAGAAGCTGAAGTGGAAATAGAGAAATCAAAGAATGCAGTTCAACCAAAAAAGCTGGAGACACAGAAAGATTTGACTAGAGATAGTTCACCCTTTGCTCCCAAGGCATTATTGAAGAAGTCTTCCCGTTTCTTTTCTGCATCATTCTTCTCTTTTAAGGAAGATGAAACTGAGTTTACACCTGCATCAGTTTTCCAGGGTCTTGTGGAGTATGCACAGAAGCAGTTGCCTACGGTGGTTCTGGGATTATTGTTAATGGGAGCAGGGGTCACCTTCTATGCCAATAGGGCAGAGAGGAGTTCTCAGCTCCTTCAACAGCCAGAGGTTATTGCAACCAGTGTTGAAGAAGTTTCCTCAAGTGCAAAGCCCCTGGTTAGACAGCTGCAGAAACTCCCTAAGAGAATTAAGAAAATTATTGCGTCATTACCTCAACAGGAGGTGAATGAGGAAGAAGCCTCCCTCTTGGACATGCTCTGGTTATTGCTGGCAAGTGTTATATTTGTGCCTATATTTCAAAAAATTCCTGGAGGTAGTCCTGTTCTCGGCTACTTGGCCGCTGGCATCTTGATTGGGCCTTATGGTCTCTCCATCATTCGTCATGTTCATGGGACTAAAGCAATTGCAGAATTTGGAGTTGTTTTCCTGTTATTCAATATTGGCCTGGAGCTCTCTGTTGAAAGGCTTAGTTCAATGAAGAAATATGTCTTTGGATTAGGCTCAGCTCAGGTTTTGGTGACTGCTGTAGTAGTTGGGTTGGTGGCTCATTATGTTTGTGGTCTACCTGGCCCTGCTGCAATTGTCGTTGGGAATGGCCTGGCGTTATCATCCACTGCTGTTGTTCTGCAGGTGTTGCAGGAGAGAGGTGAGAGCACATCGCGGCATGGTCGAGCAACTTTTTCTGTATTACTTTTTCAGGATTTGGCTGTTGTGGTCTTGCTAATACTCATACCGCTTATTTCACCAAATTCTTCCAAAGGAGGGGTTGGCTTCCAAGCTATTGCTGAAGCTCTTGGACTGGCTGCTGTTAAGGCAGCAGTTGCCATCACTGCCATAATTGCAGGTGGACGATTGCTCCTTCGACCAATATATAAGCAGATTGCCGAAAATCAGAATGCAGAAATATTTTCTGCCAATACACTCCTTGTTATTCTTGGGACAAGTCTCCTTACAGCCAGGGCAGGACTTTCCATGGCATTGGGGGCATTTTTGGCTGGTTTACTACTTGCAGAAACTGAATTTTCCTTACAGGTTGAGTCTGATATTGCTCCATACCGTGGTCTTCTATTGGGGCTCTTCTTTATGACGGTTGGAATGTCAATTGATCCAAAACTTCTCGTGTCAAACTTTCCAGTCATTACAGGGACACTGGGACTCTTAATTTGTGGCAAGACTCTATTAGTTTCTTTGATTGGTAGAAGTTTTGGGATTTCACTTATTTCTGCCATTAGAGTTGGTCTTCTTCTTGCTCCTGGAGGAGAATTTGCATTTGTGGCTTTTGGTGAAGCTGTTAATCAGGGCATAATGTCTTCCCAACTTTCCTCTTTGCTATTTCTTGTTGTGGGAATTTCAATGGCCCTCACACCATGGCTAGCTGCCGGTGGCCAGCTGATTGCTTCCCGTTTTGAGCAGCATGACGTTCGAAGCTTATTGCCTGTAGAAAGTGAGACGGATGATCTGCAAGATCATATCATTATTTGTGGATTTGGACGAGTTGGCCAGATCATTGCTCAACTACTTTCCGAGCGGCTGATCCCTTTTGTTGCACTTGACGTGAGAAGTGATAGAGTGGCAGTTGGTCGTGCTCTGGACCTCCCTGTATACTTTGGAGATGCTGGTAGTCGAGAGGTCCTACACAAGATTGGGGCTGAAAGAGCATGTGCTGCTGCAATAACTCTAGATTCTCCTGGTGCAAATTATAGAACAGTTTGGGCTCTGAGCAAGTACTTCCCAAATGTGAAGACTTTTGTTCGTGCTCATGATGTCGATCATGGCTTGAATTTAGAAAAGGCTGGAGCTACTGCTGTTGTCCCAGAGACCTTGGAACCAAGTCTTCAACTAGCAGCTGCTGTTCTTGCTCAGGCTAAACTTCCTACCTCAGAGATTGCAGCTACTATAAATGAATTCAGATCTCGCCATCTGGCTGAGCTCGCAGAGCTGTGTGAAGAAAGTGGAAGTTCTCTTGGTTATGGATATAACCAAATAATGAGCAAACCCAAATCTCAATCCTCAGAGTCATTGTTGGATGATAACCCAATCTCTGAAGGGACACTGGCAATATGA 3669 0.4295 MDIACGLPQSRVLHGDGGVGYKKRSMDRFDSCIMLRRRGSGCAFLGNSSSILKARFSGMNKISGITACRNPRLISVGEFKVSNMKKTWSSKNNNIFMGSRAIWLKCQGNDSLAYVNGNGRNVDYGEGPGEELGLGPTSSVELTPSLEEEKEGGQGGRKEGEVEAQNLDELKELLQKALKELEVSRVNSTLFEEKVKKISETAISLQDEATNALNDVNSTLDAIQEIVNEECIAKEAVQKATMTLSLAEARLQVAVESIEVAKEEHDSPQGSNESDGDNDVTEEEEALLAAQEDVQECQTNLANCEAALRCLQNKKEELQKEVEKLNEIAEKAQLNALKAEEDVTNIMLLAEQAVAFELEAAQRVNEAEIALQRADKSIASSNVDIIETIQVQDAESVSEEEKVVEGFSGDFTVEEDGNLPIDDESLLPQRSPVTPSDKTSQILVDLTQSDYLSDHENGRLDSSTEAEVEIEKSKNAVQPKKLETQKDLTRDSSPFAPKALLKKSSRFFSASFFSFKEDETEFTPASVFQGLVEYAQKQLPTVVLGLLLMGAGVTFYANRAERSSQLLQQPEVIATSVEEVSSSAKPLVRQLQKLPKRIKKIIASLPQQEVNEEEASLLDMLWLLLASVIFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAVVVGLVAHYVCGLPGPAAIVVGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKAAVAITAIIAGGRLLLRPIYKQIAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLVSNFPVITGTLGLLICGKTLLVSLIGRSFGISLISAIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMALTPWLAAGGQLIASRFEQHDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRALDLPVYFGDAGSREVLHKIGAERACAAAITLDSPGANYRTVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPTSEIAATINEFRSRHLAELAELCEESGSSLGYGYNQIMSKPKSQSSESLLDDNPISEGTLAI 1222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0907 1222 Gene3D - 613 1001 IPR038770 -
Glsi07g0907 1222 MobiDBLite consensus disorder prediction 144 159 - -
Glsi07g0907 1222 MobiDBLite consensus disorder prediction 1203 1222 - -
Glsi07g0907 1222 Pfam Sodium/hydrogen exchanger family 623 993 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Glsi07g0907 1222 FunFam K(+) efflux antiporter 2 chloroplastic 613 999 - -
Glsi07g0907 1222 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 201 1208 - -
Glsi07g0907 1222 Pfam TrkA-N domain 1026 1139 IPR003148 GO:0006813
Glsi07g0907 1222 NCBIfam monovalent cation:proton antiporter-2 (CPA2) family protein 624 904 IPR004771 GO:0006812|GO:0008324|GO:0016020
Glsi07g0907 1222 MobiDBLite consensus disorder prediction 418 440 - -
Glsi07g0907 1222 MobiDBLite consensus disorder prediction 125 159 - -
Glsi07g0907 1222 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1022 1163 IPR036291 -
Glsi07g0907 1222 Coils Coil 244 264 - -
Glsi07g0907 1222 Coils Coil 280 342 - -
Glsi07g0907 1222 ProSiteProfiles RCK N-terminal domain profile. 1025 1147 IPR003148 GO:0006813
Glsi07g0907 1222 MobiDBLite consensus disorder prediction 261 283 - -
Glsi07g0907 1222 Coils Coil 157 187 - -
Glsi07g0907 1222 Gene3D - 1021 1184 - -
Glsi07g0907 1222 FunFam K(+) efflux antiporter 2 chloroplastic 1021 1185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0907 Glsi-ChrGlsi07 8698043 8722061 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0907 90 1222 Inorganic Solute Cotransporters AT4G00630 72.038 0.0 1447