Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0901 ATGGAGGTGCCATGGCAGAATTGGTTCTCTGATTCAGATGTGGATGATAGTGTTATCTTCAATCAATGCCAACGGAACTTGTTTGATGAGGAAGAGTTCCTGAGAGAGATCCTTCGCCATCCTTCCTTCTCTTCTGAAACTGAAACTGCTACCCACGATGCTACCTTATCCACAAAACGTGCCCTTGAAAGCCATAGAAGTACTCTCACTGATCAACCAAAGGCCAATCAACGATCAAAGAGGGCTAGAAGTTCCTCTGAGGCACTAGATCACATAATGGCCGAGAGAAATAGGAGACTGCATCTCAGAGAGAAGTTCATAGCACTTGCAGCTACTATTCCTGGTTTGAAGAAGATTGACAAGGCGTCTATACTTACCGAAGCCGTCAAACACGTGAAACAGCTTCAAGAACATGTAAAAGAGTTAGAGCAACAAAGCAAGAAGACAAGTGTTGATGAAGACACAACCTCGAATTACTCTGAATCTCATGATTTCCATGGATTTAATGAAGCACTCCCTGAAGTTGAAGCAAGACTTCAGGGAGTGCTTCATTAG 555 0.4342 MEVPWQNWFSDSDVDDSVIFNQCQRNLFDEEEFLREILRHPSFSSETETATHDATLSTKRALESHRSTLTDQPKANQRSKRARSSSEALDHIMAERNRRLHLREKFIALAATIPGLKKIDKASILTEAVKHVKQLQEHVKELEQQSKKTSVDEDTTSNYSESHDFHGFNEALPEVEARLQGVLH 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0901 184 PANTHER BHLH TRANSCRIPTION FACTOR 44 179 - -
Glsi07g0901 184 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 90 150 IPR036638 GO:0046983
Glsi07g0901 184 MobiDBLite consensus disorder prediction 140 165 - -
Glsi07g0901 184 MobiDBLite consensus disorder prediction 44 88 - -
Glsi07g0901 184 Pfam Helix-loop-helix DNA-binding domain 91 136 IPR011598 GO:0046983
Glsi07g0901 184 Gene3D - 71 151 IPR036638 GO:0046983
Glsi07g0901 184 SMART finulus 92 141 IPR011598 GO:0046983
Glsi07g0901 184 Coils Coil 125 152 - -
Glsi07g0901 184 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 86 135 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0901 Glsi-ChrGlsi07 8575936 8576829 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0901 82 179 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 45.536 6.78e-22 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Glsi07g0901 HLH 3e-09 No_clan