Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0897 ATGGCCGAGAGAAATAGGAGACCGCATCTCAGAGAGAAGTTCATAGCACTTGCAGCTACTATTCCTGGTTTGAAGAAGATTGACAAGGCGTCTATACTTACCGAAGCCGTCAAACACGTGAAACAGCTTCAAGAACATGTAAAAGAGTTAGAGCAACAAAGCAAGAAGACAAGTGTTGATGAAGACACAACCTCGAATTACTCTGAATCTCATGATTGCCATAGACCTAATGAAGCACTCCCTGAAGTTGAAGCAAGACTCTTGGACAAAAAAATACGCATCAGAATTCACTTAATACCGCTTACCGTTATTGCTGAGGTTGGTGACAAATGCAACATAGCAGTGAAGGAACTTGTGAAAAAGCTGAGACTGGCTCTGTCAAAGTCCACTCGCATCGAAGAGTGA 405 0.4272 MAERNRRPHLREKFIALAATIPGLKKIDKASILTEAVKHVKQLQEHVKELEQQSKKTSVDEDTTSNYSESHDCHRPNEALPEVEARLLDKKIRIRIHLIPLTVIAEVGDKCNIAVKELVKKLRLALSKSTRIEE 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0897 134 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 43 IPR011598 GO:0046983
Glsi07g0897 134 Pfam Helix-loop-helix DNA-binding domain 2 44 IPR011598 GO:0046983
Glsi07g0897 134 PANTHER BHLH TRANSCRIPTION FACTOR 1 97 - -
Glsi07g0897 134 Gene3D - 1 64 IPR036638 GO:0046983
Glsi07g0897 134 Coils Coil 33 60 - -
Glsi07g0897 134 MobiDBLite consensus disorder prediction 48 78 - -
Glsi07g0897 134 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 58 IPR036638 GO:0046983
Glsi07g0897 134 SMART finulus 1 49 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0897 Glsi-ChrGlsi07 8522608 8523274 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0897 1 127 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 32.749 4.37e-20 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Glsi07g0897 HLH 9.6e-09 No_clan