Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0896 ATGGAGGTGCCATGGCAGAATTGGTTCTCTGATTCGGATGTGGATGATAGCGTTATCTTCAATCAATGCCAAGGGAACTCGTTTGATGAGGAAGAGTTCCTGAGAGAGATCCTTCGCCATCCTTCCTTCTCTTCTGAAAGTGAAAGTCATTATGGTACTATTATTCAAGAGAATTCCATCTCTAAACTTGCTTCTTCTGATAAGAATGCCTCATCCTCACCGTCTCCATCAAGTTATATTCTGTCTTTCGATAATTCAACTCTGATACCAGCTGCTACCCACGATGCTACCTTATCCACAAAACGTGCCCTTGAAAGCCATAGAAGTACTCTCACTGATCAACCAAAGGCCAATCAACGATCAAAGAGGGCTAGAAGTTCCTCTGAGGCACTAGATCACATAGTGGCCGAGAGAAATAGGAGACTGCATCTCAGAGAGAAGTTCATAGCACTTGCAGCTACTATTCCTGGTTTGAAGAAGATTGACAAGGCGTCTATACTTACCGAAGCTGTCAAACACGTGAAACAGCTTCAAGAACATGTAAAAGAGTTGGAGCAACAAAGCAAGAAGACAAATGTTGATGAAGACACAACCTCTAATTACTCTGAATCTCCTGAATGCCATGGACCTAATGAAGTACTCCCTGAAGTTGAAGCAAGACTCTTAGACAAACAAATACGCATCAGAATTCACTGTGAGAAACAAGCAGGCATTATGCTCAAAATATTGTTCCTCCTTCAAAGTCTTCGTTTCTCTATAATCAGTAATAGCGCCTTCCCATTTGGGAATTCCACTCTTGACATTACCGTTATTGCTGAGGTTGGTGACAAATGCAACATAGCAGTGAAGGAACTTGTGAAAAAGCTGAGACTGGCTCTGTCAAAGTCCACTCGCATCGAAGAATGA 906 0.4227 MEVPWQNWFSDSDVDDSVIFNQCQGNSFDEEEFLREILRHPSFSSESESHYGTIIQENSISKLASSDKNASSSPSPSSYILSFDNSTLIPAATHDATLSTKRALESHRSTLTDQPKANQRSKRARSSSEALDHIVAERNRRLHLREKFIALAATIPGLKKIDKASILTEAVKHVKQLQEHVKELEQQSKKTNVDEDTTSNYSESPECHGPNEVLPEVEARLLDKQIRIRIHCEKQAGIMLKILFLLQSLRFSIISNSAFPFGNSTLDITVIAEVGDKCNIAVKELVKKLRLALSKSTRIEE 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0896 301 Coils Coil 167 194 - -
Glsi07g0896 301 MobiDBLite consensus disorder prediction 102 131 - -
Glsi07g0896 301 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 133 191 IPR036638 GO:0046983
Glsi07g0896 301 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 128 177 IPR011598 GO:0046983
Glsi07g0896 301 PANTHER BHLH TRANSCRIPTION FACTOR 20 295 - -
Glsi07g0896 301 Pfam Helix-loop-helix DNA-binding domain 133 178 IPR011598 GO:0046983
Glsi07g0896 301 SMART finulus 134 183 IPR011598 GO:0046983
Glsi07g0896 301 Gene3D - 114 193 IPR036638 GO:0046983
Glsi07g0896 301 MobiDBLite consensus disorder prediction 183 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0896 Glsi-ChrGlsi07 8450195 8451386 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0896 1 294 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 32.927 1.52e-40 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Glsi07g0896 HLH 1.4e-08 No_clan