Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0894 ATGGAGGTGCCATGGCAGAATTGGTTCTCTGATTCGGATGTGGACGATAGCGTTATCTTCAATCAATGCCAAGGGAACTCATTTGATGAGGAAGAGTTCCTGAGAGAGATCCTTCGCCATCCTTCCCTCTCTTCTGAAAGTGAAAGTCATTATTGCACTATTATTCAAGAAAACTCCATCTCTAAACTTGCTTCTTCTGATAAGAATGCCTCACCCTCACCCTCACCGTCTCCATCAACTTACATCCTGTCTTTCGATAATTCAACTCTGATACCAGCTGCTGCCCACGATCGTACCTTATCCACAAAACGTGCCCTTGAGAGCCATAGAAGTACTCTCACTGATCAATCAAAGGCCAATCAACGATCAAAGAGGGCTAGAAGTTCCTCTGAGGCACTAGATCACATAGTGGCCGAGAGAAATAGGAGACTGCATCTCAGAGAGAAGTTCATAGCACTTGCAGCTACTATTCCTGGTTTGAAGAAGATTGACAAGGCGTCTATACTTACCGAAGCTGTCAAACACGTGAAACAGCTTCAAGAACATGTAAAAGAGTTAGAGCAACAAAGCAAGAAGACAAGTGTTGATGAAGACACAACCTCTAATTACTCTGAATCTCATGATTGCCATGGACCTAATGAAGCACTCCCTGAAGTTGAAGCAAGACTCTTAGACAAACAAATACGCATCCGAATTCACTGTGAGAAACAACCACGCATTATGCTCAAAATATTGTTGCTCCTTCAAAGTCTTCATTTCTCTATAATCAGTAATACCGCCTTCCCATTTGGGAATTCCACTCTTGACATTACCGTTATTGCTGAGGTTGGTGACAAATGCAACGTAGCAACGAAGGAACTTGTGAAAAAGCTGAGACTGGCTCTGTCGAAGTCCGCTTCCATCCAAGAGTGCTCCAAGCTAGCTAGATGA 930 0.4344 MEVPWQNWFSDSDVDDSVIFNQCQGNSFDEEEFLREILRHPSLSSESESHYCTIIQENSISKLASSDKNASPSPSPSPSTYILSFDNSTLIPAAAHDRTLSTKRALESHRSTLTDQSKANQRSKRARSSSEALDHIVAERNRRLHLREKFIALAATIPGLKKIDKASILTEAVKHVKQLQEHVKELEQQSKKTSVDEDTTSNYSESHDCHGPNEALPEVEARLLDKQIRIRIHCEKQPRIMLKILLLLQSLHFSIISNTAFPFGNSTLDITVIAEVGDKCNVATKELVKKLRLALSKSASIQECSKLAR 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0894 309 Coils Coil 169 196 - -
Glsi07g0894 309 SMART finulus 136 185 IPR011598 GO:0046983
Glsi07g0894 309 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 135 193 IPR036638 GO:0046983
Glsi07g0894 309 Pfam Helix-loop-helix DNA-binding domain 135 180 IPR011598 GO:0046983
Glsi07g0894 309 PANTHER BHLH TRANSCRIPTION FACTOR 19 297 - -
Glsi07g0894 309 MobiDBLite consensus disorder prediction 184 212 - -
Glsi07g0894 309 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 130 179 IPR011598 GO:0046983
Glsi07g0894 309 Gene3D - 129 200 IPR036638 GO:0046983
Glsi07g0894 309 MobiDBLite consensus disorder prediction 100 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0894 Glsi-ChrGlsi07 8435699 8436997 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0894 1 296 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 32.831 1.50e-37 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Glsi07g0894 HLH 1.4e-08 No_clan