Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0877 ATGGCAACTGATATGCAGAAGCTGATTGGAACAAGTGAAGATGATGAGGAAGAAATGGAAATGGATGTGAAAGAAGAGGATGACGATGATGAAGAGAATGGAGGTAGTCATGGTGCTGCTCCAGTGATGGTAGATGTTGATGGTGGGGTGGCAACTGCTAGTGGGAACAATACGTTTCAACAGCACCAGCAATTCCAAGAACAAGTAAGCACCCCAGGTGGAGGTAATCGACGGTGTAGACCGCTAGAAGAGAAAGAGAGAACAAAGCTAAGAGAGCGGCATCGAAGGGCTATAACAGCTAGGATCTTGGCAGGGCTCCGGAGGCACGGCAATTACAATCTTAGAGTTAGAGCTGACATAAATGATGTCATTGCTGCTCTAGCAAGGGAAGCTGGATGGGTGGTTCTTCCTGATGGCACTACTTTTCCTTCAAGATCTCAGGGCCAGAAGCCCGCTGGTGGTACTTCTACTGCAGTGGTGACTTCATCATCTTCCCATATGGCTCCACAACAGACTACACCTGCTTCCCTTAAAGGAGTAACTTCTGGCTGTAGGAGCTCATTGGAGTATAATGCATGTCGAATGAAAGGTGTTTTTATGCCAGCTCCTTCACCATATGATCTATCCTCAGGTTCCCAGTCTCAAACTTCATCCATGGCGGCGGGTGGAGAAGAACAGAGAGACAACCATCCTCTTATTGGTGGTTCAATGGATAGCATTGATGAGAAGCAGATTGTTGATATGCCCCACAGATTACCAGAGCGTGATTTTGCTGGTACCCCTTATGTTCCAGTTTATGTGATGCTACCGTTGGGTGTCATTAATTTGAAGTGTGAACTTGTTGATCCGGATGGTCTACTAAAGCAGCTGAGGGTTTTAAAATCAATTCATGTTGATGGTGTTATGGTAGACTGCTGGTGGGGAATAGTGGAGGCACATGCTCCACAAGAGTATAATTGGAATGGTTACAAGAAACTCTTTCAGATGGTGCGTGAGCTTAAACTTAAATTACAGGTTGTGATGTCTTTCCATGAATGTGGAGGCAATTTTGGTGATGATGTTTGTATTCCAATTCCCCACTGGGTTGCTGAAATAGGTCGGAGCAATCCAGACATTTTTTTCACCGATAGAGAGGGAAGGCACAACCCTGAATGTCTTTCTTGGGGAATAGATAAGGAACGGGTTTTAAGGGGTCGGACTGCTGTTGAGGTTTATTTTGACTTCATGAGAAGCTTCAGGGTAGAGTTTGACGAGTATTTTGAGGATGGTGTAATCTCCATGATTGAAGTTGGACTGGGTCCACGTGGGGAGTTAAGATACCCATCTTGTCCTGTAAAGCATGGTTGGAGATATCCTGGTATTGGTGAATTCCAGTGCTATGATCAATATTTGTTGAAAAGTCTTAGGAAGGCAGCAGAAGCAAGGGGGCACTCTACTTGGGCTAAAGGACCAGATAATGTTGGTACCTATAATTCTCAGCCACACGAAACGGGTTTCTTTTGTGATGGAGGTGATTATGATGGTTACTATGGCAGGTTCTTCCTTAGCTGGTACTCTCAGGTTTTAATTGATCATGCAAACCGGGTGCTTTCTCTGGCAAAATTAGCTTTTGAGGGAACCTGCATTGCTGCAAAGCTATCAGGTAGTCACTGGTGGTACAAGACAGCAAGTCATGCTGCTGAATTAACTGCTGGGTTTTACAACCCATGCAATCGTGATGGTTATGCCGCAATAATGGCAATGCTAAAGAATAATGGAGCAAGTTTAAACTTTGCTTGTGATGACTTGCACACTTTGAACCAGCATGAGGACTTTCCAGAGGCATTTGCAGATCCTGAGGGATTAGTCTGGCAAGTATTGAATGCTGCTTGGGATGTTTGCCTTCCAGTTGCCAGTGAGAATGCCATTCCTGGCCTAAATAGAGTTAGCTATAATAAGATTTTGGATAATGCCAAGCCCGTGAATGATCCAGATGGAAAGCATTTTACGTCTTTTACTTACCTGAGGCTCAGTCCACTTCTTATGGAAAGACACAACTTCATAGAGTTCGAACGATTTGTCAAGAGAATGCATGGGGAAGCTGTTCTTGATCTTCAGATATAG 2103 0.4446 MATDMQKLIGTSEDDEEEMEMDVKEEDDDDEENGGSHGAAPVMVDVDGGVATASGNNTFQQHQQFQEQVSTPGGGNRRCRPLEEKERTKLRERHRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSRSQGQKPAGGTSTAVVTSSSSHMAPQQTTPASLKGVTSGCRSSLEYNACRMKGVFMPAPSPYDLSSGSQSQTSSMAAGGEEQRDNHPLIGGSMDSIDEKQIVDMPHRLPERDFAGTPYVPVYVMLPLGVINLKCELVDPDGLLKQLRVLKSIHVDGVMVDCWWGIVEAHAPQEYNWNGYKKLFQMVRELKLKLQVVMSFHECGGNFGDDVCIPIPHWVAEIGRSNPDIFFTDREGRHNPECLSWGIDKERVLRGRTAVEVYFDFMRSFRVEFDEYFEDGVISMIEVGLGPRGELRYPSCPVKHGWRYPGIGEFQCYDQYLLKSLRKAAEARGHSTWAKGPDNVGTYNSQPHETGFFCDGGDYDGYYGRFFLSWYSQVLIDHANRVLSLAKLAFEGTCIAAKLSGSHWWYKTASHAAELTAGFYNPCNRDGYAAIMAMLKNNGASLNFACDDLHTLNQHEDFPEAFADPEGLVWQVLNAAWDVCLPVASENAIPGLNRVSYNKILDNAKPVNDPDGKHFTSFTYLRLSPLLMERHNFIEFERFVKRMHGEAVLDLQI 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0877 700 MobiDBLite consensus disorder prediction 204 229 - -
Glsi07g0877 700 Pfam Glycosyl hydrolase family 14 266 684 IPR001554 GO:0000272|GO:0016161
Glsi07g0877 700 MobiDBLite consensus disorder prediction 1 43 - -
Glsi07g0877 700 Gene3D Glycosidases 254 699 - -
Glsi07g0877 700 SUPERFAMILY (Trans)glycosidases 257 695 IPR017853 -
Glsi07g0877 700 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 212 693 IPR001554 GO:0000272|GO:0016161
Glsi07g0877 700 MobiDBLite consensus disorder prediction 11 33 - -
Glsi07g0877 700 PRINTS Plant beta-amylase signature 666 680 IPR001371 GO:0000272|GO:0016161
Glsi07g0877 700 PRINTS Plant beta-amylase signature 681 695 IPR001371 GO:0000272|GO:0016161
Glsi07g0877 700 PRINTS Plant beta-amylase signature 423 432 IPR001371 GO:0000272|GO:0016161
Glsi07g0877 700 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 506 525 IPR001554 GO:0000272|GO:0016161
Glsi07g0877 700 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 615 637 IPR001554 GO:0000272|GO:0016161
Glsi07g0877 700 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 297 311 IPR001554 GO:0000272|GO:0016161
Glsi07g0877 700 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 318 336 IPR001554 GO:0000272|GO:0016161
Glsi07g0877 700 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 557 568 IPR001554 GO:0000272|GO:0016161
Glsi07g0877 700 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 340 361 IPR001554 GO:0000272|GO:0016161
Glsi07g0877 700 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 433 455 IPR001554 GO:0000272|GO:0016161
Glsi07g0877 700 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 540 556 IPR001554 GO:0000272|GO:0016161
Glsi07g0877 700 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 575 598 IPR001554 GO:0000272|GO:0016161
Glsi07g0877 700 MobiDBLite consensus disorder prediction 142 181 - -
Glsi07g0877 700 Pfam BES1/BZR1 plant transcription factor, N-terminal 76 209 IPR008540 -
Glsi07g0877 700 MobiDBLite consensus disorder prediction 206 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0877 Glsi-ChrGlsi07 8208131 8214753 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0877 1 697 Glycoside Hydrolase AT2G45880 68.240 0.0 987
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Glsi07g0877 Glyco_hydro_14 1.1e-101 CL0058