Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0871 ATGTCTCTAAATATCCTCAAAACCATTCTCCTAATACTATCAGTGCTTCTATTGGCATCAGACTCCAACGTCGTTTACGGCAAAACGCATGTAAGAGTTTATAACAATTTAGATCACAATCTGGACCTCGCCTTTCATTGCAAATCAGCAGATGAAGATCTTGGAGAGAAGGTTCTCCATCATGATGATTACTTTGAATGGAGTTTTGATGTAAATTTCTTTCATACGACACAATTCTTGTGTAGCTTTCAATGGGAAGGTGCTTTTCACAGAGTGATTAGAAGTATTGGAGGCATTTCAAAGCTGAGTTCTCGCTTTCTTCTTTACTTTATTTTCGAAATTTTTGATGAGGTGGTCTCTTGTGCTGTCCTGGGTAAGGTCAGAGCTGAAGAAGCTCGGGGGTCCTTGCAAATATTGCAATGCCCAATGCTTCTCTTGGCACCAGAGTACTCCAACGCCGTTAATGGCAAAACGCATGTGAGAATCTACAACTATTTAGATCACGCTCTGGACCTGACCCTTCATTGCAAATCTGCAGATAATGACCTTGGAGAGCACCTTCTCCGAAGTGCCGAGTACTTTGAATGGAGTTTCCATGTGAATTTATTGGGAACAACTCGATTCTATTGTAGCTTTCAATGGGCCCCAGATGCCCTTCGCAGGTTCGATATATACAAAGCACATAGGGACGCTAGGTTGTGCTCTCAGTGCAATTGGAGAATTAAGCAAGATCAACCATTTCACGATGGATTAATCCCAGCCAAAACTCATGTGAGAGTGTACAATTATTTAGATCACACTCTGGACTTGAGGGTTCATTGCAAATCTGCAGATGATGATCTGGGAGTGCATGTTCTTCACAGTGCTGAGTACTTTGAATGGAGTTTCAGGGTTAATTTCTTTTGGACAACGCAATACTATTGTAGCTTTGAATGGCGAGGTGGGTTTCACTGCTTCGATATATACATAGCAGTTAGGGACGATGGCAAGTGCCTTCAGTGCTATTGGAGAATTAAGCAAGATCACCCATGTATGCTTGATTCTAACGATCAGTATGACCTTTGCTATCCATGGAATAATTAA 1083 0.4155 MSLNILKTILLILSVLLLASDSNVVYGKTHVRVYNNLDHNLDLAFHCKSADEDLGEKVLHHDDYFEWSFDVNFFHTTQFLCSFQWEGAFHRVIRSIGGISKLSSRFLLYFIFEIFDEVVSCAVLGKVRAEEARGSLQILQCPMLLLAPEYSNAVNGKTHVRIYNYLDHALDLTLHCKSADNDLGEHLLRSAEYFEWSFHVNLLGTTRFYCSFQWAPDALRRFDIYKAHRDARLCSQCNWRIKQDQPFHDGLIPAKTHVRVYNYLDHTLDLRVHCKSADDDLGVHVLHSAEYFEWSFRVNFFWTTQYYCSFEWRGGFHCFDIYIAVRDDGKCLQCYWRIKQDHPCMLDSNDQYDLCYPWNN 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0871 360 Pfam Plant self-incompatibility protein S1 30 90 IPR010264 -
Glsi07g0871 360 Pfam Plant self-incompatibility protein S1 257 358 IPR010264 -
Glsi07g0871 360 Pfam Plant self-incompatibility protein S1 159 247 IPR010264 -
Glsi07g0871 360 PANTHER - 253 349 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0871 Glsi-ChrGlsi07 8151366 8156695 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0871 28 90 Carbohydrate Esterase AT3G16970 34.921 5.22e-08 49.7