Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glsi07g0869 | ATGTCTCCATTTCTCAAAACCATCCTTTTATTACTATCAGTGCTTCTCATGGCATCAGACTCCAATGTCGTTTATGCCAAAACGCATGTGAGACTGTACAACTTTATAGACAACAATCAGGACCTGACCCTTCATTGCCAATCTGGAGATGATGATCTTGGAGAGCATCTGCTTCACCCTCTTGATTCCTTTGAATGGAGTTTCGGTGTGGATATTATTGGTACAACACTATACTATTGTAGCTTCCAATGGCAAGGTGTTCTTCACGAGTTCGATATATTCAAAGGAGAAAGGGACGATGCCATCTGCAACGGTATGTGCATGTGGAGAATTAAGAGTGGTGGACCATGTATGTTCAATCCAGCTAACCTGCAGTATGACATTTGCTATGGTTGGCCATCTTCATGA | 408 | 0.4216 | MSPFLKTILLLLSVLLMASDSNVVYAKTHVRLYNFIDNNQDLTLHCQSGDDDLGEHLLHPLDSFEWSFGVDIIGTTLYYCSFQWQGVLHEFDIFKGERDDAICNGMCMWRIKSGGPCMFNPANLQYDICYGWPSS | 135 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glsi07g0869 | 135 | PANTHER | - | 24 | 120 | IPR010264 | - | |
| Glsi07g0869 | 135 | Pfam | Plant self-incompatibility protein S1 | 29 | 132 | IPR010264 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Glsi07g0869 | Glsi-ChrGlsi07 | 8144421 | 8144828 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Glsi07g0869 | 26 | 134 | Carbohydrate Esterase | AT3G16970 | 33.929 | 1.21e-19 | 77.4 |