Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0835 ATGGCGGGAGGAACGTTTTCCTTTCTAAAATGTCTCCGAAATTCTTCAGTCAAGGGTTCTTTAAACGTGGAGTTAAGCCAACCACAGCACCGTATTATGAACTTTACAAGATATGCTGATCGCATTCATGTTAGATTACCAAGTGATTCGCTGAGTCAAGCTTATTCCAAAGGAGAGTTACATTTACCTGAAATTTTTACCAAGAATCAGTTTGGAACTTTGACTTCTGAAAATAGAATTCTCGTTAATATCAAACCCAATGCTTCATTTTCGCCAAAATTTTCTAGTTTATGTATCCAAAATGTTCTTCCTTTTGCTTCAATGACCCACTTGTTGAATCATCGATCATATTCGTCATCTCTGAGTGGCAAAGGAAGTAGAGACACAAGCACTGAAGTTCCTGCTGGTTCTGGTGCAAGTGACATGAATGCCAGCAGTGATTCTGTGGACGCAAGTGATTGGGCTGATAAGATTAAAGATGCTTGGCAGAGTGCAGTAGAGACAGCAAAATATACTGGACAAAAGGTTAAAGAAGCCTCTGATGAGTTGACTCCATATGCTCAACAGTTTCTCGACTCTCATCCGTACCTTAAAGATGTGGTTATTCCTGTTGGTGGCACATTAACTGCTACTCTAATAGCTTGGATTGTGATGCCTCGAATTTTGAGGAAATTTCACAAATATGCAATGCAAGGTCCTGCTGCAATATTTCCTGGAAGTATGTTTGGGGAGCCCGTTCCATATGAAAAAAGTTTTTGGAGTGCATTGGAGGAGCCAGTGCGATATTTGGTTACCTTCATGTCATTCTCACAGATTGGTGTTATGGTAGCTCCAACAACTATAGCCTCACAATACCTTGCACAGGCTTGGAGGGGTGCCGTGGTTCTTTCATTTATATGGTTTTTGCATCGATGGAAATCAAATGTTTTGACACGTATATTGTCTGATCAAAGATTACTTGGGCTTGATCGGGAGAAATTGCTTACTCTAGATAAAATCTCATCTGTTGGTCTATTTGTGATTGGCATAATGGCTTTAGCTGAGGCTTGTGGTGTGGCTGTGCAATCTATTGTAACTGTTGGTGGTATAGGAGGAGTTGCTAGTGCTTTTGCTGCCAGAGACGTCCTTGGCAATGTATTCAGTGGTTTATCTATGCAGTTTTCGAAGCCCTTTTCAGTTGGAGATACAATAAAAGCTGGCTCGATTGAGGGTCAAGTGGTGGAAATGGGACTTACTACCACATCATTGCTGAATGCTGAGAAGTTCCCAGTTTTAGTGCCAAATTCACTTTTTTCCAGCCAGGTAATAGTGAATAAGTCTCGTGCTGAATGTCGTGCCATCATCTCCAAAATTCCTCTGCAGATTGAGGATTTAAATAAGATTCCCCAGATTTCGGATGACATAAAGAGCATGCTAAGCTCAAATGAAAAGATTTTCTTAGGAAGAGAGATTCCCTGTTGTTTCTTGTCGCGCATAGGAAGCTCATATGCAGAATTGACTCTTGGATACAACCTAAAATACATGCGTAAAGACGAGATGTTTGCTGCAGAGCAAGAAATTCTTCTGCAGGCAGTCCAGATTATCAAGAAGCATGGTGCTGCACTAGGCAGTATCTGGCATGACATGTAG 1629 0.4113 MAGGTFSFLKCLRNSSVKGSLNVELSQPQHRIMNFTRYADRIHVRLPSDSLSQAYSKGELHLPEIFTKNQFGTLTSENRILVNIKPNASFSPKFSSLCIQNVLPFASMTHLLNHRSYSSSLSGKGSRDTSTEVPAGSGASDMNASSDSVDASDWADKIKDAWQSAVETAKYTGQKVKEASDELTPYAQQFLDSHPYLKDVVIPVGGTLTATLIAWIVMPRILRKFHKYAMQGPAAIFPGSMFGEPVPYEKSFWSALEEPVRYLVTFMSFSQIGVMVAPTTIASQYLAQAWRGAVVLSFIWFLHRWKSNVLTRILSDQRLLGLDREKLLTLDKISSVGLFVIGIMALAEACGVAVQSIVTVGGIGGVASAFAARDVLGNVFSGLSMQFSKPFSVGDTIKAGSIEGQVVEMGLTTTSLLNAEKFPVLVPNSLFSSQVIVNKSRAECRAIISKIPLQIEDLNKIPQISDDIKSMLSSNEKIFLGREIPCCFLSRIGSSYAELTLGYNLKYMRKDEMFAAEQEILLQAVQIIKKHGAALGSIWHDM 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0835 542 Pfam Mechanosensitive ion channel 332 533 IPR006685 GO:0016020|GO:0055085
Glsi07g0835 542 MobiDBLite consensus disorder prediction 118 148 - -
Glsi07g0835 542 SUPERFAMILY Mechanosensitive channel protein MscS (YggB), transmembrane region 287 372 IPR011014 GO:0016020
Glsi07g0835 542 SUPERFAMILY Sm-like ribonucleoproteins 374 439 IPR010920 -
Glsi07g0835 542 Gene3D - 390 438 IPR023408 -
Glsi07g0835 542 Gene3D - 285 389 - -
Glsi07g0835 542 PANTHER YNAI-RELATED MECHANOSENSITIVE ION CHANNEL 154 537 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0835 110 541 Mechanosensitive Ion Channel Family AT4G00290 63.889 0.0 573