Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0829 ATGGCTAATCCTTCGCTTCCTCAGTCTTCTACGTCGTCGTTTCTTAGTCAATTTCGTGCCTTTCCAGCTCCATTGTCTTCGGGGCTCCTTTATAGAAGCGGGAATGGAGGGGTGGCGGCGCCCGTGAAGGCCTCGGAGTCCGGGGTTGTGCTGGTGGAGAAAACTGAAGCAGAGAAAGTCCTCCGGCTCAAAACAACTTACAATGAGAAAATTGTTCCCTTGCTTAAGGAAGAATTCTCCTACACCAATATACACGAGGTCCCTAAAATTGAGAAGATTGTGGTTAACTGCGGTATTGGAGATGCTGCACAAAATGCAAAGGGTTTGGAAGCAGCAATGAATGATCTAGCAGTCATCACCGGGCAGAGGCCTGTCAAGACACGAGCAAGGGCTTCCGTTGCCACCTTCAAGATCAGGGAAGGTCAACCGCTTGGGATTGCTGTAACACTCAGAGGAAAAATGATGTACTCATTCCTCGATCGAGTTATCAACTTGGGACTTCCTAGGACAAGGGATTTCCAAGGTGTTAACGCCAACAGCTTTGATGGGCATGGAAATTACAGCATCGGCATTCGAGACCAAAGTGTGTTCCCAGAAATCAGGTATGATGCCATTGGTAATCCTAGGGGAATGGATATCTGCATAGCAACAACAGCAAAAACTGATCAAGAGGCGCAGAGATTACTGGCTCTTATGGGCATGCCATTCAGAGAGGGAGGTGGTGCGGCAGCTGCAATTCGCAAAAAGAAGCTCAAGTCTCACCATTTTGACTCAAAATCAAAGGGAAGAGGAAGGAAGTAA 801 0.4782 MANPSLPQSSTSSFLSQFRAFPAPLSSGLLYRSGNGGVAAPVKASESGVVLVEKTEAEKVLRLKTTYNEKIVPLLKEEFSYTNIHEVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLAVITGQRPVKTRARASVATFKIREGQPLGIAVTLRGKMMYSFLDRVINLGLPRTRDFQGVNANSFDGHGNYSIGIRDQSVFPEIRYDAIGNPRGMDICIATTAKTDQEAQRLLALMGMPFREGGGAAAAIRKKKLKSHHFDSKSKGRGRK 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0829 266 FunFam 50S ribosomal protein L5 58 238 - -
Glsi07g0829 266 Hamap 50S ribosomal protein L5 [rplE]. 60 238 IPR020930 GO:0003735|GO:0005840|GO:0006412
Glsi07g0829 266 ProSitePatterns Ribosomal protein L5 signature. 116 132 IPR020929 GO:0003735|GO:0005840|GO:0006412
Glsi07g0829 266 SUPERFAMILY RL5-like 62 237 IPR022803 -
Glsi07g0829 266 Gene3D - 54 238 IPR022803 -
Glsi07g0829 266 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 64 244 IPR002132 GO:0003735|GO:0005840|GO:0006412
Glsi07g0829 266 Pfam ribosomal L5P family C-terminus 143 236 IPR031309 -
Glsi07g0829 266 Pfam Ribosomal protein L5 83 139 IPR031310 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0829 89 216 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 28.125 9.19e-08 49.3