Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0827 ATGGTGTCGGTGAATCCGAACCCAGCTCAGGGCTTTTACTTTTTCGATCCCACCAATATGGGTCTTCCCGGTGTCAATCCTTTGCCACTGGCCGCCGTTCCCGCTACTGCCGCGGCATCTTCATCCACGGCCACAACTACGGCGTCTTGTGGGGAGGATCCGAATAAGAAGATTCGAAAACCGTACACGATTACCAAATCTAGGGAGAGCTGGACAGAGCAGGAGCACGACAAGTTTCTCGAAGCTCTCCAACTATTTGACCGTGACTGGAAGAAGATTGAAGCCTTTGTCGGTTCAAAATCTGTTATCCAGATACGAAGTCATGCACAAAAGTATTTCCTGAAAGTTCAGAAGAATGGAACAAGTGAACATGTACCTCCTCCTCGGCCAAAGCGAAAGGCTGCTCATCCATACCCCCAAAAAGCACCTAAAAATGCCCTAGCTGTATCCCAAGTGACAAAGCCATTGGAATCTTCATCTGCTTTCAATGAACCTGCCTACAGTTATCGACCAGACTCATCATCTGTGCTCGGAACTCCCGTTACCAGTGTGCCTTTGTCTAATTGGAATTATAATGTTGTGCCCCTAGCCAGCGTGCCACAAGTGACTAAAGATGACATTGTATTGGCTGGGCAAACTGCTCCACTTAATTGTTGCTATAGCAGCAGTAATGAGAGCACTCCTAGGGCTTGGCCAAGTAACAAAGGGATTGATAAGGGGGACCAAGACAAGCTGATAAAAGTAATGCCAGATTTTGCACAAGTCTATCGCTTCATCGGCAGTGTGTTTGATCCAAATGCAAAAAATCACGTACAGAAACTGAAACAGATGGACCCAATAAATGTGGAAGCAGCATTGCTATTGATGAGAAACCTCTCCATCAATTTAATGAGTCCCGAATTTGAGGATCACAGACAGTTGCTTTCATCGTACGGTGCTGACTTCGAGAAGATGAAGTCTGGTAGGCTCTGCAGCAATCCTCTAACTGATAAATCCGAGAGTGCTGTTCTGTCTGCTTAA 1020 0.4637 MVSVNPNPAQGFYFFDPTNMGLPGVNPLPLAAVPATAAASSSTATTTASCGEDPNKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKSVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQKAPKNALAVSQVTKPLESSSAFNEPAYSYRPDSSSVLGTPVTSVPLSNWNYNVVPLASVPQVTKDDIVLAGQTAPLNCCYSSSNESTPRAWPSNKGIDKGDQDKLIKVMPDFAQVYRFIGSVFDPNAKNHVQKLKQMDPINVEAALLLMRNLSINLMSPEFEDHRQLLSSYGADFEKMKSGRLCSNPLTDKSESAVLSA 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0827 339 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Glsi07g0827 339 FunFam protein REVEILLE 6 isoform X1 70 118 - -
Glsi07g0827 339 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Glsi07g0827 339 Gene3D - 71 118 - -
Glsi07g0827 339 ProSiteProfiles SANT domain profile. 66 119 IPR017884 -
Glsi07g0827 339 PANTHER SWI/SNF COMPLEX-RELATED 39 297 - -
Glsi07g0827 339 MobiDBLite consensus disorder prediction 118 145 - -
Glsi07g0827 339 CDD SANT 70 113 IPR001005 -
Glsi07g0827 339 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Glsi07g0827 339 SUPERFAMILY Homeodomain-like 62 118 IPR009057 -
Glsi07g0827 339 SMART sant 67 115 IPR001005 -
Glsi07g0827 339 NCBIfam myb-like DNA-binding domain, SHAQKYF class 66 115 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0827 Glsi-ChrGlsi07 7683132 7689507 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi07g0827 Myb_DNA-binding 5.4e-11 CL0123