Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0783 ATGGGAAACAGTGAGGAAGGGAAATCTATTAAAGCTGAAAAACATTCTTTGCCTGTAACGGGGGACCAGGCCAATCAGAGCAGCCAGACCAATATTCATGTTTATCCGGATTGGGCGGCCATGCAGGCATATTATGGGACTAGAGTCACCATGCCACCATTCTACAACCCAGCTGTGACTTCTGGTCACGCTCCTCACCCATACATGTGGGGGCCACCACAGCCTATGATGCCACCATATGGGGCACCTTATGCAGCAATTTATTCACACGGAGGTGTTTATACTCACCCTGCAGTTCCTATTGGGCCACATTCCCATGGTCAAGGAGTTCCACCTTCACCTGCAGCTGGAACTCCATTGAGCATAGAGACACCAACCAAATCGTCTGGAAATACTGATCAGGGTTTAATGAAGAAATTGAAGGGGTTTGATGGACTTGCAATGTCAATAGGAAATGGCAATGCTGAGAGTGCTGAGCGTGGAACTGAAAACAGGCTATCACAGCGTTTGGGTATTGAGGGTTCAAGCGATGGAAGTGATTGCAACACTGCAGGGACTAATCAAACAAGAAGGAAAAGAAGCCGTGAGGGAACACCAACCACTGATGGAGATGGGAAAACTGATATACAAGCCAGTCCAGTTTCTAAAGATGCTGCGCCTTCTAATAAGATGATGACAATTACCCCAGCCAGTGTTGGCGGAACATTAGCTGGACCTGTAGTTTCTTCAGGTATGACCACGGGATTGGAGCTGAGGAACCTTCCGCCTGTGCTTTCTAAGACAAATTCCACAAGTGTCCCACAACCTTGTGCAGTAGTGCCTCCTGAAGCTTGGTTACAGAATGAGCGTGAGCTGAAACGAGAAAGGAGAAAGCAATCAAATCGAGAATCTGCTAGAAGGTCCCGGCTAAGAAAGCAGGCTGAGACTGAAGAACTTGCACAAAAAGTTGAATCCTTGACAGCTGAGAATGTGACATTGCAATCAGAAATAAATCGATTGACCGAAGGTTCTGAGAAACTTAGGATGGAAAATGATGCATTAATGGAAAAACTGAAAAATGCACAACGGGGACAAAAAGAAGAGAGCAAGAGGGCTACACCTAGTACAGAAAACTTACTATCCAGGGTTAATAATTCCAGTTCAAATGACAGAACTATGGAGAGTGAGAATGATTTTTGTGACAACAAACGAAATTCAGGGGCAAAGCTGCATCAACTACTGGATAACAAACCTAGAGCTGATGCTGTGGCAGCTAGCTGA 1260 0.4571 MGNSEEGKSIKAEKHSLPVTGDQANQSSQTNIHVYPDWAAMQAYYGTRVTMPPFYNPAVTSGHAPHPYMWGPPQPMMPPYGAPYAAIYSHGGVYTHPAVPIGPHSHGQGVPPSPAAGTPLSIETPTKSSGNTDQGLMKKLKGFDGLAMSIGNGNAESAERGTENRLSQRLGIEGSSDGSDCNTAGTNQTRRKRSREGTPTTDGDGKTDIQASPVSKDAAPSNKMMTITPASVGGTLAGPVVSSGMTTGLELRNLPPVLSKTNSTSVPQPCAVVPPEAWLQNERELKRERRKQSNRESARRSRLRKQAETEELAQKVESLTAENVTLQSEINRLTEGSEKLRMENDALMEKLKNAQRGQKEESKRATPSTENLLSRVNNSSSNDRTMESENDFCDNKRNSGAKLHQLLDNKPRADAVAAS 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0783 419 Pfam Disordered region downstream of MFMR 133 260 - -
Glsi07g0783 419 MobiDBLite consensus disorder prediction 1 15 - -
Glsi07g0783 419 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 289 304 IPR004827 GO:0003700|GO:0006355
Glsi07g0783 419 MobiDBLite consensus disorder prediction 367 386 - -
Glsi07g0783 419 Pfam bZIP transcription factor 282 344 IPR004827 GO:0003700|GO:0006355
Glsi07g0783 419 MobiDBLite consensus disorder prediction 104 137 - -
Glsi07g0783 419 Pfam G-box binding protein MFMR 1 100 IPR012900 -
Glsi07g0783 419 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 284 347 IPR004827 GO:0003700|GO:0006355
Glsi07g0783 419 SMART brlzneu 282 346 IPR004827 GO:0003700|GO:0006355
Glsi07g0783 419 MobiDBLite consensus disorder prediction 170 236 - -
Glsi07g0783 419 MobiDBLite consensus disorder prediction 353 419 - -
Glsi07g0783 419 SUPERFAMILY Leucine zipper domain 285 340 IPR046347 GO:0003700|GO:0006355
Glsi07g0783 419 Gene3D - 285 338 - -
Glsi07g0783 419 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 396 IPR044827 GO:0003700|GO:0006355|GO:0043565
Glsi07g0783 419 CDD bZIP_plant_GBF1 287 335 IPR045314 GO:0003700|GO:0006355
Glsi07g0783 419 MobiDBLite consensus disorder prediction 283 309 - -
Glsi07g0783 419 MobiDBLite consensus disorder prediction 387 409 - -
Glsi07g0783 419 Coils Coil 302 357 - -
Glsi07g0783 419 MobiDBLite consensus disorder prediction 1 28 - -
Glsi07g0783 419 MobiDBLite consensus disorder prediction 203 229 - -
Glsi07g0783 419 FunFam G-box binding factor 3 285 340 - -
Glsi07g0783 419 MobiDBLite consensus disorder prediction 170 188 - -
Glsi07g0783 419 MobiDBLite consensus disorder prediction 119 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0783 Glsi-ChrGlsi07 6939361 6943424 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0783 1 418 bZIP Transcription Factor Family AT2G46270 51.773 9.75e-118 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi07g0783 MFMR_assoc 7.4e-20 No_clan