Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0774 ATGAAGGAAACCAGGTTCTCTGAGCAGAGAATTGTTACTCATAAGCTTGTCAAAAATGGGTTTCCGGGTGGGTCACCAAGGGTTGTTCGGGTTTCTGTGACTGATAACTATGCGACTGATTCTTCGAGTGAGGAAGAACATGAACGGTTTGGTCATCAACCCAGAGTGAAGAAGCTCATCCACGAGATAAGAATCGAAGACTTTTCGAATTTCATGGTTAATAGGGACGTTCATGAAGGTCAGAAAGTACAAAGGCCCAAAACGGTTAAACCCATTACCAAATCTAAGCAGAATCTTCCCAATGGCAAGAAATTTCGTGGGGTTCGCCAGCGGGAGTGGGGGCGGTGGGCGGCGGAGATCCGAGACCCTTTCCGGCGAGCTAGAAAGTGGCTGGGTACGTTTGACACAGCGGAAGAGGCTGCTTTGGTTTATGACAGAGAGGCTATTCGTCTTAGAGGTTCTGATGCTCTTACGAATTTAATCAAACCACCTGACAAATCTCCAACCTCTGCTGCCCAAGCATTTAAAGATTGTCCAATAAGGGATGGGTCTGAACCTGTTGATTATGCTGCCAAAGTGTTTGAAGATAGTGCAATGAGAAACGAGTCATCTAATTGTTTGTTGAATTTTGAATATGATTCTAGTAAAGAGTCCCATGATTTATCATCATCGTCACCGACTTCTGTTCTCAGATACGGCACTAGCGAACCTGGATGGACAGCCATGGAAGAGTTGATAGAAGAACCCAGTTTGCAAGGCAGTTTTTTGTTTCCAGATTCACCGTTTGTTAGTGGTTTTTCGGATTATGAAACTCCTTCTACAACACTTCTCGATTCAATTTTCAACGAGGACTTCTCCTTTCATCTAGATGAAGATTTTGAATCTTTTATATGGGATGTTGATAATTACTTTCAAGACCCTTTGACATGA 930 0.4333 MKETRFSEQRIVTHKLVKNGFPGGSPRVVRVSVTDNYATDSSSEEEHERFGHQPRVKKLIHEIRIEDFSNFMVNRDVHEGQKVQRPKTVKPITKSKQNLPNGKKFRGVRQREWGRWAAEIRDPFRRARKWLGTFDTAEEAALVYDREAIRLRGSDALTNLIKPPDKSPTSAAQAFKDCPIRDGSEPVDYAAKVFEDSAMRNESSNCLLNFEYDSSKESHDLSSSSPTSVLRYGTSEPGWTAMEELIEEPSLQGSFLFPDSPFVSGFSDYETPSTTLLDSIFNEDFSFHLDEDFESFIWDVDNYFQDPLT 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0774 309 CDD AP2 103 159 IPR001471 GO:0003700|GO:0006355
Glsi07g0774 309 SUPERFAMILY DNA-binding domain 104 160 IPR016177 GO:0003677
Glsi07g0774 309 PRINTS Ethylene responsive element binding protein signature 127 143 IPR001471 GO:0003700|GO:0006355
Glsi07g0774 309 PRINTS Ethylene responsive element binding protein signature 105 116 IPR001471 GO:0003700|GO:0006355
Glsi07g0774 309 ProSiteProfiles AP2/ERF domain profile. 104 161 IPR001471 GO:0003700|GO:0006355
Glsi07g0774 309 Gene3D AP2/ERF domain 103 161 IPR036955 GO:0003700|GO:0006355
Glsi07g0774 309 MobiDBLite consensus disorder prediction 80 102 - -
Glsi07g0774 309 Pfam AP2 domain 104 153 IPR001471 GO:0003700|GO:0006355
Glsi07g0774 309 FunFam Ethylene-responsive transcription factor 2 103 162 - -
Glsi07g0774 309 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 26 233 - -
Glsi07g0774 309 SMART rav1_2 104 167 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0774 Glsi-ChrGlsi07 6854497 6855426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0774 1 169 AP2-EREBP Transcription Factor Family AT4G27950 45.714 7.50e-39 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Glsi07g0774 AP2 1.4e-11 CL0081