Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0750 ATGGCCACCAAACGAAGGAGAAAGCAACAGCAGACTAGTAGCAGTTACTCTCAAGAGGTGAGCAGCATTGAATGGGAGGTCATTAACATGTCAGAGCAAGAACAAGATCTCATTCACAAAATGTACAGACTAGTCGGAGACAGGTGGGGTCTGATAGCAGGGCGGATACCAGGTCGGAAAGCTGAAGAGATAGAGAGGTTTTGGATGATGACGCACGGAGCAGTGTTTGCTGCCAAGAGAGAAGAGCTCAAGAGTCGTAAATAG 264 0.4773 MATKRRRKQQQTSSSYSQEVSSIEWEVINMSEQEQDLIHKMYRLVGDRWGLIAGRIPGRKAEEIERFWMMTHGAVFAAKREELKSRK 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0750 87 MobiDBLite consensus disorder prediction 1 21 - -
Glsi07g0750 87 FunFam MYB-like transcription factor 29 71 - -
Glsi07g0750 87 SUPERFAMILY Homeodomain-like 31 71 IPR009057 -
Glsi07g0750 87 SMART sant 26 74 IPR001005 -
Glsi07g0750 87 CDD SANT 29 70 IPR001005 -
Glsi07g0750 87 Gene3D - 31 71 - -
Glsi07g0750 87 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 29 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0750 Glsi-ChrGlsi07 6609068 6610805 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0750 30 68 MYB Transcription Factor Family AT5G52600 58.974 1.25e-12 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi07g0750 None None None