Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0742 ATGTTTAATTCTACCCAGAGTTTCTACATTCCCAATGAGGCATTAATAAAAGCAATCAACGAATGGTGGAAAAAGAGAAAAGAACAGATAAGAAAACCTGCATCTGCAAGACCAAGGTGGCGATCAAGAGTTCAGTCCCTGCAAGATTTTACTTTGAACTCTACAATGGGATGCATACCTCAATCACCAGCAAACGGGGACCTGGATTCAATCTCAGTTGAAGATTTGAATGAGAATCAAGAAGCAAATTTGTGTTCTTATGCTTCATGGCTGGGAAAGCATCCCTCCGCCTTGGACAATTTTGAGGAAATGATGAGCATTGCTAAAGAGAAAGAGATTGTTATGTTTTTGGATTATGATGGAACACTCACTCCCATTGTAGATGACCCTGATAAGGCTGACATGAATGATGTTATGCGTGCAGCAGTACATGAGGTTGCTTGTTATTTTCCCACAGCAATAGTTAGTGGAAGGAGCAGAAACAAGGTATATGAATTTGTAAAGTTGAGGAATGTCTACTATGCTGGAAGTCATGGGATGGATATATCAACCCCAATTGGATCTTCAAAATCTGAAGACCAAAAGCATCAGACAAGGGCTATTGATGAAAAGGGTAATCAAGTTGTTCACTTTCATCCTGCAAAAGAATTTCTACCTACAATACAAGAGATAATTAAAGTTTTGAAAGAAAAAGTTTCAAGAATAAAGGGCTCCATGGTTGAAGATAACACGTTCTGCATCACTGTACACTACAGGCAAGTGAAAAATGAAGAGGACGTCGGTATTCTCAGAGACACGGTGGAGTCCATCATGAAAGCTTACCCCAATTTTCACATATCAGGAGGAAGAAAGGTTATGGAGATTCGCCCAAATATAAACTGGAATAAAGGTTGTGCTATGCAGTATTTACTTGACACTCTTGGCTTTGCCAACTTCAACAATGTTCTACCAATTTATATAGGGGATGATAGAACTGATGAAGATGCCTTTAAGGTTATAAGACACATAGGACAAGGTTTTCCAATAATTGTTTCATCAAAAGCTAAGGAGACCAAAGCTTCTTATTCTCTGCGTGACCCAGCTGATGTGATGACTTTCTTAATTCGTCTGGCAAAGTGGAAGAAAAGCTTGTTATAG 1137 0.3896 MFNSTQSFYIPNEALIKAINEWWKKRKEQIRKPASARPRWRSRVQSLQDFTLNSTMGCIPQSPANGDLDSISVEDLNENQEANLCSYASWLGKHPSALDNFEEMMSIAKEKEIVMFLDYDGTLTPIVDDPDKADMNDVMRAAVHEVACYFPTAIVSGRSRNKVYEFVKLRNVYYAGSHGMDISTPIGSSKSEDQKHQTRAIDEKGNQVVHFHPAKEFLPTIQEIIKVLKEKVSRIKGSMVEDNTFCITVHYRQVKNEEDVGILRDTVESIMKAYPNFHISGGRKVMEIRPNINWNKGCAMQYLLDTLGFANFNNVLPIYIGDDRTDEDAFKVIRHIGQGFPIIVSSKAKETKASYSLRDPADVMTFLIRLAKWKKSLL 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0742 378 NCBIfam trehalose-phosphatase 113 371 IPR003337 GO:0003824|GO:0005992
Glsi07g0742 378 CDD HAD_TPP 114 364 - -
Glsi07g0742 378 SUPERFAMILY HAD-like 114 373 IPR036412 -
Glsi07g0742 378 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 46 375 IPR044651 GO:0004805|GO:0005992
Glsi07g0742 378 FunFam Trehalose 6-phosphate phosphatase 220 378 - -
Glsi07g0742 378 Pfam Trehalose-phosphatase 116 360 IPR003337 GO:0003824|GO:0005992
Glsi07g0742 378 Gene3D - 113 214 IPR023214 -
Glsi07g0742 378 Gene3D - 215 377 IPR023214 -
Glsi07g0742 378 NCBIfam HAD-IIB family hydrolase 115 337 IPR006379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0742 Glsi-ChrGlsi07 6540256 6549639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0742 109 367 Trehalose Biosynthesis Gene Families AT1G70290 25.899 5.92e-09 55.8