Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0739 ATGAGTACCAAGGGACAAAAAGTTGTGAGGTTTGAGGATTGGAGTTCAGAGTCAGCTATTAGTGTTGAGAAGACAAATTCTAATGGGGATGGATTTCATCAGACACAAGCTAAACCAAGTGTAAAGGCTGTTTTTGAGAGCATTAGAAGAAGACTTGAGAGTAGTTCTGGAAAGACAAAATACTGGAGAAAACCCATAACTGTAAACCCAGTAAGTGATGGAACGCCCAAAAAATTGGCTTCTAAGAGCAGAATTCTTGATCCACAGAGGCCACTCCTTCAGCAATGGAACAAAGTATTTGTAATAACATGTGTGATGGCTGTGTCTGTGGACCCACTGTTCTTTTACGTCCCAGTGATTGATGACGAGGAAAAATGCCTTAAATTGGATGAAAATATGCAGATTATTGTCAGTGTTTTTCGTACATTCTTTGATCTTTTCTACGTTCTCCACATAATCTTTCAGTTTCGAACTGGGTTTATTGCTCCTTCTTCTCGAGTATTTGGAAGGGGTGAGCTCATTGATGATCCTCTGGCTATCGCAAAAAGATACTTATCTTCCTACTTCATCATTGACATTCTATCAATTATTCCACTTCCTCAGGTGGTTGTTTTAGCTATTAGACCATCAAACATAAGCTCGGATTCATTTGAGGTGACGGTGAAGGAGTGGTTGAAGTATATTGTATTAATCCAGTATGTGCCAAGACTTCTACGGATCTATCCATTATTCAAGGAAGTAACTAGAACTTCTGGCATACTGACTGAGACGGCATGGGCTGGTGCTGCTTATAATCTCTGTCTCTATATGCTAGCAAGTCATGTGGTTGGAGCTTTCTGGTACCTGTTTTCGGTAGAAACAGAGCTTCGGTGCTGGCGCCAAGAGTTGCAGAAGAATGATACCTTCTCTGGTACTTCATACTGGAGCTGTGCCGACCGGAAGCTGGCTGTCATTTCATATCTCAATAGTTCTTGCCGCTTGATTGATCCCGATAGCATTGAAGGCTCCTCAACCTTCAATTTTGGAATATTTATTGATGCTCTAAAATCTGAAGTGGCAGAATCAACAACAGATTTTCCTAAGAAGTTCTTCTACTGCTTTTGGTGGGGCTTGCGCAATCTAAGTTCTCTTGGACAAAACCTGAAGACAAGTACATACGTGGGGGAGATAATCTTTGCTATCTTCATTGCCATCTTTGGGTTGGTTTTGTTCTCATTACTTATTGGAAACATGCAGAAATATCTTCAATCTACAACTGTTAGAGTTGAAGAAATGAGAGTCAAAAGGCGAGATGCAGAGCAATGGATGTCCCACCGTATGCTGCCCGAGTACCTAAGGGAAAGAATTAGACGGTATGAGCATTACAAATGGCAAGAAAATAGGGGTGTGGAGGAGGAAACATTAATTCGAAACCTTCCCAAAGATCTCAAAAGGGACATAAAGAGCCATCTTTGCTTAGATCTACTTAAAAAAGTGCCAATGTTTGAGAAAATGGATGAACAGTTGTTGGATGCAATGTGTGATAGACTGAAGCCAGTGCTTTATACAGAGAAGAGCTACATTGTTCGTGAAGGAGATCCAGTTGATGAAATGCTCTTCATTATGCGAGGAAACCTTGCTACTATGACGACAAATGGTGGAAGAACTGGATTCTTCAATTCCCTTGATCTCAAGGCTGGTGACTTCTGTGGAGAAGAGCTTCTAACATGGGCCTTGGACCCTAACTCCTCCTCAAATCTTCCCATTTCAACCAGAACTGTGGAAACTATATCAGAAGTTGAAGCCTTTGCTCTCATGGCCGATGACTTGAAGTTCGTTGCTTCCCAATTTCGACGACTTCACAGCAAACAGATCCAACACACTTTCAGGTTCTATTCCATGCAGTGGAGGACATGGGCTGCTTGTTTCATACAAGCAGCTTGGCGACGCTACTGCAAGAAGAAGATTGACAGATCATTACGTGAAGCAGAAGAGAGGCTACAAGATGCTTTGGCAAATGAGGAAGTGTCCTCACCAAGTCTTGGTGCAACCATATATGCATCAAGGTTCACTGCCAAGGCATTGAGAAGCTTGCGTCAAAATGGTGAACGCAAGAACAGAGTGCCTCAGAGATTACTCCCTCTGCTACCTCAAAAACCAGCTGAGCCTGATTTCACAACCTAA 2163 0.4216 MSTKGQKVVRFEDWSSESAISVEKTNSNGDGFHQTQAKPSVKAVFESIRRRLESSSGKTKYWRKPITVNPVSDGTPKKLASKSRILDPQRPLLQQWNKVFVITCVMAVSVDPLFFYVPVIDDEEKCLKLDENMQIIVSVFRTFFDLFYVLHIIFQFRTGFIAPSSRVFGRGELIDDPLAIAKRYLSSYFIIDILSIIPLPQVVVLAIRPSNISSDSFEVTVKEWLKYIVLIQYVPRLLRIYPLFKEVTRTSGILTETAWAGAAYNLCLYMLASHVVGAFWYLFSVETELRCWRQELQKNDTFSGTSYWSCADRKLAVISYLNSSCRLIDPDSIEGSSTFNFGIFIDALKSEVAESTTDFPKKFFYCFWWGLRNLSSLGQNLKTSTYVGEIIFAIFIAIFGLVLFSLLIGNMQKYLQSTTVRVEEMRVKRRDAEQWMSHRMLPEYLRERIRRYEHYKWQENRGVEEETLIRNLPKDLKRDIKSHLCLDLLKKVPMFEKMDEQLLDAMCDRLKPVLYTEKSYIVREGDPVDEMLFIMRGNLATMTTNGGRTGFFNSLDLKAGDFCGEELLTWALDPNSSSNLPISTRTVETISEVEAFALMADDLKFVASQFRRLHSKQIQHTFRFYSMQWRTWAACFIQAAWRRYCKKKIDRSLREAEERLQDALANEEVSSPSLGATIYASRFTAKALRSLRQNGERKNRVPQRLLPLLPQKPAEPDFTT 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0739 720 SMART cnmp_10 494 625 IPR000595 -
Glsi07g0739 720 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 75 718 - -
Glsi07g0739 720 Pfam Ion transport protein 95 422 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Glsi07g0739 720 ProSiteProfiles cAMP/cGMP binding motif profile. 494 578 IPR000595 -
Glsi07g0739 720 FunFam Cyclic nucleotide-gated ion channel 1 421 485 - -
Glsi07g0739 720 MobiDBLite consensus disorder prediction 694 720 - -
Glsi07g0739 720 FunFam Cyclic nucleotide-gated ion channel 1 492 610 - -
Glsi07g0739 720 Coils Coil 646 666 - -
Glsi07g0739 720 SUPERFAMILY cAMP-binding domain-like 423 616 IPR018490 -
Glsi07g0739 720 CDD CAP_ED 494 625 IPR000595 -
Glsi07g0739 720 SUPERFAMILY Voltage-gated potassium channels 88 416 - -
Glsi07g0739 720 Gene3D Jelly Rolls 492 612 IPR014710 -
Glsi07g0739 720 Gene3D - 98 418 - -
Glsi07g0739 720 Gene3D Helix hairpin bin 421 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0739 Glsi-ChrGlsi07 6502135 6508044 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0739 1 720 Ion Channels AT5G53130 65.655 0.0 952