Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0723 ATGGAGTCCGGAACTCGACGGAAAATCGAGGAAGCGGTGACTGACATACTGAAGAAATCCAACCTAGAAGAGATAACGGAGTTCCAGGTCCGAATTACGGCCTCGGAGCGGCTGGGAGTCGATCTTTCTGACTCCGAGCACAGACAAGTTGTGAGAAGCGTAGTGGAGTCTTATCTGCTCGCTATCGCGGAGGAAGAGGGCAGGGACAAAGTGTGTGAACCCAGTGCTCCAGAAGAGACTAGAGAGACGGCTCAGGAAGAGCAGGACGCGAAGCCGACGAATGAGGTTAAAGAGGACTCAGATCGCACTATTTGTCAGCTATCAAACAGGAGGAATGTGGTGGTTCAAGATTTCAGAGGGAAAAAGTTGGTGTCAATTAGGGAATATTATCATAAAGATGGAAAACAGCTTCCTACTGCCAAAGGTATAAGTTTGTCGACTGAACAATGGTCTGCCTTCAAGAAAAGTGTCCCTGCTATAGAGGAAGCTATTACAAAGATGGAAGCAAAGATGAGAGCTGAGGTTCATGGTAAGCAAAATGGAGATGTGCTGAACCCGTTGCTTGATGCTACCCCTAATGAGCCTGTCCAGATTGAGATCAGCCGATTTGATGGGAAAAATTACTATTTCTGGAGACCAATTGTGCTGCCAATGGGTATGTTTGGAACCCTTTACTAA 678 0.469 MESGTRRKIEEAVTDILKKSNLEEITEFQVRITASERLGVDLSDSEHRQVVRSVVESYLLAIAEEEGRDKVCEPSAPEETRETAQEEQDAKPTNEVKEDSDRTICQLSNRRNVVVQDFRGKKLVSIREYYHKDGKQLPTAKGISLSTEQWSAFKKSVPAIEEAITKMEAKMRAEVHGKQNGDVLNPLLDATPNEPVQIEISRFDGKNYYFWRPIVLPMGMFGTLY 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0723 225 Pfam DEK C terminal domain 5 59 IPR014876 -
Glsi07g0723 225 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 5 169 IPR045125 GO:0003713|GO:0060261
Glsi07g0723 225 Pfam Transcriptional Coactivator p15 (PC4) 105 155 IPR003173 GO:0003677|GO:0006355
Glsi07g0723 225 SUPERFAMILY ssDNA-binding transcriptional regulator domain 104 166 IPR009044 GO:0003677|GO:0006355
Glsi07g0723 225 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 3 60 IPR014876 -
Glsi07g0723 225 SUPERFAMILY DEK C-terminal domain 5 59 - -
Glsi07g0723 225 MobiDBLite consensus disorder prediction 69 102 - -
Glsi07g0723 225 Gene3D Transcriptional Coactivator Pc4; Chain A 95 172 IPR009044 GO:0003677|GO:0006355
Glsi07g0723 225 FunFam RNA polymerase II transcriptional coactivator KELP 96 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0723 Glsi-ChrGlsi07 6397963 6406163 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Glsi07g0723 DEK_C 7.5e-12 No_clan