Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0721 ATGAAGGTTGAGGTGGGTTTAGGAGGTGTGTTATGGAATGATGAGGAAAGAGCCATGGTAGCTACGGTTCTAGGCCCACGAGCTTTCGATTACTTGATTACCAACCCTGTTTCGAATGAGAATCTATTAATGGCTGTAGGGAGTGACGAAAATCTGCAGAACAAGCTCTCGGATCTCGTGGAACGTCCCAACGTGTCGAATTTCAGCTGGAACTATGCGATTTTCTGGCAAATATCGCAGTCAAAATCTGGGGATTGGGTTTTGGGTTGGGGAGATGGGTGTTGCAGAGAACCCAGGGAGCAAGAAGAAGGTGGAGTACCTGGGCTTCTTAGTCTTCGTCTTGAGGATGAGATGGAGCAGAGGATGAGAAAAGGGGTTCTTCAGAAGCTTCACACAACCTTTGGGGGTTCAGATGAGGACAATTATGCTTTTGGATTAGACAGGGTTACTGATACAGAAATGTTCTTTCTTGCTTCCATGTACTTCTCTTTTCCTCGCGGGCATGGTGGCCCAGGTAAGTGCCTTGCCTCCGGGAAGCATTTGTGGCTATCTGATGCACTGAAATCTAACTCTGATTACTGCGTGAGATCACTTTTAGCAAAATCAGCTGGAATTCAGACAATTGTTTTGGTCCCCACTGACCTTGGAGTGGTGGAATTGGGTTCTGTGAGGATGGTAGCAGAGAGCTTAGAATTGTTGCAGGCGATAAAATCGGTGTTTTCAACCCAATCTTCGTTTCCCAGGATTCCCCCACTTTCCCCTTTGCATGTGGTAAATGAGAAGAGAGATGAAAATGGTCTCTTCCCTGGTTTGGCAATTGGGGATAAAGTAGAGGTTGTTCCAAAGATTTTTGGGCAGGATTTGAACTCTGGAAACTCCGGTCGAACCCAGTTTAGAGAGAAGCTTGCTGTTAGGAAAATGGAGGAGAGGCCTTGGGGATGCCACTCCAATGGTAATAACATTAGCTTTCCGAATACTCGAAATGGTATTCATGGCTCGAGTTGGGCAGCTAATCAAGGTGGGAAACAGGCTAATCCTGCTGAAATTTATGCTTCCAGGTGCTCGGCTGGCAATTTACCGGAGGTAGTTAACAGGGTTAGGCAAGATTTTAGGATTAACAACTATCAACCACAAAGGCAGGTGCAAATGCAAATTGATTTCTCAGGAGCCACTTCAAGGCCTTCTGTGAAACCAACCAGTGCTGAATCAGAGCTTTCTGATGTTGAGGCTTCGTGCAAAGAGGAGCAGCCGGGTGCGACAGATGAAAGGAGGCCTAGGAAACGGGGCAGAAAGCCGGCTAATGGAAGGGAAGAACCCCTCAATCATGTGGAAGCAGAGAGGCAAAGGCGTGAGAAGCTGAACCAGCGGTTCTATGCGTTACGATCCGTTGTGCCCAACATATCCAAGATGGACAAAGCCTCTTTACTAGGAGATGCTATTGCTTATATCAATGAGCTTCAGGCAAAACTCAAGATCATGGAATCTGAGAGAGAGAGATTTGGAAGCACTTCAAGGGATGGACCAGCGTCGGAGGCTGAGCCGAGAGCAGAAAATCATAGTCTTGGTCCTGATGTGGATATTCAAGCCGCCCAAGATGAGGTGATTGTAAGGGTGAGCTGCCCTCTCAATTGTCATCCTGCATCAAAAGTAATCCAGGCATTCAAAGAGGCACAAATTAGTATTGTTGAGTCTAAACTTGCAGCTGCAAATGATACCGTCTTCCATACTTTTGTTATCAAATCTCAAGGATCCGAGCAGCTGACAAAGGAGAAGTTGGTTGCAGCATTTTCCCGAGAATCCACTGGCCTACCACCATTGTCACCGGCCGGGTAA 1833 0.4692 MKVEVGLGGVLWNDEERAMVATVLGPRAFDYLITNPVSNENLLMAVGSDENLQNKLSDLVERPNVSNFSWNYAIFWQISQSKSGDWVLGWGDGCCREPREQEEGGVPGLLSLRLEDEMEQRMRKGVLQKLHTTFGGSDEDNYAFGLDRVTDTEMFFLASMYFSFPRGHGGPGKCLASGKHLWLSDALKSNSDYCVRSLLAKSAGIQTIVLVPTDLGVVELGSVRMVAESLELLQAIKSVFSTQSSFPRIPPLSPLHVVNEKRDENGLFPGLAIGDKVEVVPKIFGQDLNSGNSGRTQFREKLAVRKMEERPWGCHSNGNNISFPNTRNGIHGSSWAANQGGKQANPAEIYASRCSAGNLPEVVNRVRQDFRINNYQPQRQVQMQIDFSGATSRPSVKPTSAESELSDVEASCKEEQPGATDERRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAIAYINELQAKLKIMESERERFGSTSRDGPASEAEPRAENHSLGPDVDIQAAQDEVIVRVSCPLNCHPASKVIQAFKEAQISIVESKLAAANDTVFHTFVIKSQGSEQLTKEKLVAAFSRESTGLPPLSPAG 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0721 610 Coils Coil 483 503 - -
Glsi07g0721 610 MobiDBLite consensus disorder prediction 387 406 - -
Glsi07g0721 610 PANTHER MYC 39 595 IPR045084 GO:0003700|GO:0006355
Glsi07g0721 610 CDD bHLH_AtAIB_like 434 499 - -
Glsi07g0721 610 MobiDBLite consensus disorder prediction 407 448 - -
Glsi07g0721 610 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 52 240 IPR025610 -
Glsi07g0721 610 MobiDBLite consensus disorder prediction 497 522 - -
Glsi07g0721 610 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 440 500 IPR036638 GO:0046983
Glsi07g0721 610 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 437 486 IPR011598 GO:0046983
Glsi07g0721 610 FunFam Transcription factor bHLH13 430 504 - -
Glsi07g0721 610 Pfam Helix-loop-helix DNA-binding domain 441 487 IPR011598 GO:0046983
Glsi07g0721 610 Gene3D - 430 502 IPR036638 GO:0046983
Glsi07g0721 610 MobiDBLite consensus disorder prediction 497 520 - -
Glsi07g0721 610 SMART finulus 443 492 IPR011598 GO:0046983
Glsi07g0721 610 MobiDBLite consensus disorder prediction 387 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0721 Glsi-ChrGlsi07 6384986 6386818 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0721 5 601 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G01260 51.994 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Glsi07g0721 bHLH-MYC_N 5.6e-55 CL0161