Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0713 ATGGAAGCCAAGACCCATCATCAATTACCATGTGCAGCTTGCAGGATGCTTCGCAGGAGATGTGACAGTAAGTGCCTACTTGCACCATATTTCCCAGCCGATGAGGTTGACAAGTTTGCTGGTGTCCATAGAGTGTTTGGTGCTAGCAATGTTATCAAAATGATTCAGATGGTGGAGGAGACAAAGAGAGAGGATGCAGTTAAAGCCATAGTGTACGAGGCAATGGCAAGGGTGAGAGACCCAGTATACGGCAGCGCTGGAGCTATTTACCATCTCCAGAACATAGTTCAACAACTCAAAGTGGAGCTTGAAGCCACGACAGGTCAGATATCACAGGTGCAAGAACAAAGAGACCAGTTATTAAGGATTCATACCAACTCTCATCATGATCTTGATCAAGATCCTGTCTTTTCCATCAATGACCCTATCTTTGATGATTATTACAGCACTTTCTCATCAGTAGACGATTATGATCTTCCTGTAGCTTATGACCCATTTGAATTTCCTGTACAAGGTGACTGGGTTTTGTAG 531 0.4388 MEAKTHHQLPCAACRMLRRRCDSKCLLAPYFPADEVDKFAGVHRVFGASNVIKMIQMVEETKREDAVKAIVYEAMARVRDPVYGSAGAIYHLQNIVQQLKVELEATTGQISQVQEQRDQLLRIHTNSHHDLDQDPVFSINDPIFDDYYSTFSSVDDYDLPVAYDPFEFPVQGDWVL 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0713 176 Coils Coil 96 116 - -
Glsi07g0713 176 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
Glsi07g0713 176 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Glsi07g0713 176 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0713 Glsi-ChrGlsi07 6267346 6268475 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0713 10 158 AS2 family AT1G07900 48.366 5.40e-44 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi07g0713 LOB 5.8e-38 No_clan