Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0711 ATGGAAGCCAATACCCATCATCTACCATGCGCAGCTTGCAGGATGCTTCGCAGGAGATGTGACAGTAAGTGCCCACTTGCACCATATTTCCCAACTGATGAGGTTGACAAGTTTGCTGGTGTGCATAGAGTGTTTGGTGCTAGCAATGTTATCAAAATGATTCAGATGGTGGAGGAGACAAAGAGAGAGGATGCAGTTAAAGCCATAGTGTACGAGGCGATGGCAAGGGTGAGAGACCCAGTACATGGCAGCGCTGGAGCCATTTCCCATCTCCAGAACATGGTTCAACAACTCAAAGTGGAGCTTGAAGCCATGAAAGCTCGGATATCACAGATGCAAGAACAAAGAGACCAGTTATTGAGGATTCATACCAATTCTCATCATCATCTTGATCATGATCCTGTCTTTTCCGTCAATGACCCTATCTTTGATGATTATTATAGCACTTTCTCATCAGTAGACGTTTATGATCTTCCTACAGCTTATAATGATCCAGTTCAATTTCCTGTACAAGGTGACTGGGTTTTGTAG 531 0.4407 MEANTHHLPCAACRMLRRRCDSKCPLAPYFPTDEVDKFAGVHRVFGASNVIKMIQMVEETKREDAVKAIVYEAMARVRDPVHGSAGAISHLQNMVQQLKVELEAMKARISQMQEQRDQLLRIHTNSHHHLDHDPVFSVNDPIFDDYYSTFSSVDVYDLPTAYNDPVQFPVQGDWVL 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0711 176 Coils Coil 88 122 - -
Glsi07g0711 176 Pfam Lateral organ boundaries (LOB) domain 9 106 IPR004883 -
Glsi07g0711 176 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 118 - -
Glsi07g0711 176 ProSiteProfiles LOB domain profile. 8 109 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0711 Glsi-ChrGlsi07 6260432 6261538 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0711 9 157 AS2 family AT1G07900 47.059 1.92e-42 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi07g0711 LOB 6.5e-38 No_clan