Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0708 ATGGCCAACCTGGTCACCTTGTTTCTGCTGGGGCTAAGCATAATATCCACTGTCTACAATGTGAAACTTATAACAAATGCAATGGCCATAGGAGGACCAACCAGATTCTATGATTTTAAGGTACAAACCAAAAAAGTTACCAAACTTTGCAGCTCCAAGGACATTGTCACAATCAATGGCATGTTTCCAGGGCCAGTGGTTTATGCCCAAGAAGATGACAGGCTCACCGTCAAAGTTACCAATAAGACACCCTTCAATGTCACAATCCACTGGCATGGTGTTCGGCAAAGGCTATCATGCTGGTATGATGGGCCTTCATATATTACACAATGTCCAATTCAAGCAGGCCAAAGTTTCACGTACAATTTCACAGTGGTGAAGCAGAAAGGTACCTTCTTCTGGCATGCTCATGTATCTTGGCTCCGAGGAACGGTTTACGGTGCCATGGTTGTTTATCCAAAGGCTAGATTACCTTATCCATTCAAGACTCCCTATCAAGAGCAGATAATCATACTAGGGGAGTATTGGCTAAAGGATCTTGTGCAGATTGAACAAGCCACTCTAGAAAGTGGAGGGGCTCCTCCAAGAGCAGATGCATATACCATTAACGGTCATCCAGGTCCCAACTACAATTGCTCCACCAATGATGTCTACAAAATTGATGTGATTCCTCGGAAGACCTATTTGTTAAGACTAATTAATGCGGGTTTAAACACGGAGAACTTCTTTGCCATTGCTAATCACAAATTAACAATTGTGGAAGTTGATGCTGAATACACCAAGCCATTCACGATAGACACAGTGATGCTTGGACCAGGCCAGACATTGAATGCCCTACTCACTGCTGATCAACCAGTAGGGAAATACTCCATGGCTGTGGCACCCTACAAGTCTGGCAGGATTGTTAATTATCAAAATGTTTCGGCCATTGCCTACTTCAACTATGTAGGCGCAGCACCAGATAGCTTATATTTACCAGCCAAATTACCTAAACTTGACGATAATCTGGCAGTTAAGACAGTCATGGATGGATTAAGGAGCTTAAATCAAGTCAATGTTTTCAAAGAAGTTGATGAAAACTTATTCATCACCATTGGATTGAATGTTCAAAAGTGTCATTCAAAGACACCGAAGGAAAACTGCCAAGCCATTAATAATGGGGTCATGGCAGCTTCAATGAACAATATAAGTTTCATCCACCCCAATATTTCAATCCTGGAAGCTTATTATAAGAACATAAAAGGATTATATACTGAAGATTTCCCTGATGCACCCCTTAAGTTCTATGACTTTGTTTATGGGGCACCTAATAACATTCCATATGACACACAGTCATTGAATGGGACTAGAACAAAGGTCCTTGAATATGGCAGCAGGGTACAACTCATTCTGCAGGACACTGGTACAGTCAACACTGAAAACCACCCAATTCATTTTCATGGCTACAGCTTTTATGTTGTAGGTTATGGGACAGGGAACTATAACCCACAAACTGCACAATACAACTTAGTAGATCCCCCTTACATGAACACAGTTGGAGTTCCAGTGGGTGGATGGGCAGCAATTCGCTTTGTTGCTGATAATCCAGGGGTATGGTACATGCATTGTCACATTGAGATACACCAGTCATGGGGACTAGGAATGGTGTTTATAGTGAAGAATGGAAAAGAAGAGCAGGAATCATTACCACATCCTCCAGCAGACCTGCCACATTGCTAA 1719 0.4218 MANLVTLFLLGLSIISTVYNVKLITNAMAIGGPTRFYDFKVQTKKVTKLCSSKDIVTINGMFPGPVVYAQEDDRLTVKVTNKTPFNVTIHWHGVRQRLSCWYDGPSYITQCPIQAGQSFTYNFTVVKQKGTFFWHAHVSWLRGTVYGAMVVYPKARLPYPFKTPYQEQIIILGEYWLKDLVQIEQATLESGGAPPRADAYTINGHPGPNYNCSTNDVYKIDVIPRKTYLLRLINAGLNTENFFAIANHKLTIVEVDAEYTKPFTIDTVMLGPGQTLNALLTADQPVGKYSMAVAPYKSGRIVNYQNVSAIAYFNYVGAAPDSLYLPAKLPKLDDNLAVKTVMDGLRSLNQVNVFKEVDENLFITIGLNVQKCHSKTPKENCQAINNGVMAASMNNISFIHPNISILEAYYKNIKGLYTEDFPDAPLKFYDFVYGAPNNIPYDTQSLNGTRTKVLEYGSRVQLILQDTGTVNTENHPIHFHGYSFYVVGYGTGNYNPQTAQYNLVDPPYMNTVGVPVGGWAAIRFVADNPGVWYMHCHIEIHQSWGLGMVFIVKNGKEEQESLPHPPADLPHC 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0708 572 SUPERFAMILY Cupredoxins 163 334 IPR008972 -
Glsi07g0708 572 SUPERFAMILY Cupredoxins 29 176 IPR008972 -
Glsi07g0708 572 NCBIfam laccase 34 572 IPR017761 GO:0046274|GO:0048046|GO:0052716
Glsi07g0708 572 Gene3D - 17 153 IPR008972 -
Glsi07g0708 572 Pfam Multicopper oxidase 446 555 IPR011706 GO:0005507|GO:0016491
Glsi07g0708 572 Gene3D - 165 350 IPR008972 -
Glsi07g0708 572 Pfam Multicopper oxidase 41 155 IPR011707 GO:0005507
Glsi07g0708 572 SUPERFAMILY Cupredoxins 356 572 IPR008972 -
Glsi07g0708 572 Pfam Multicopper oxidase 168 317 IPR001117 -
Glsi07g0708 572 CDD CuRO_2_LCC_plant 168 315 IPR034285 -
Glsi07g0708 572 ProSitePatterns Multicopper oxidases signature 1. 530 550 IPR033138 -
Glsi07g0708 572 ProSitePatterns Multicopper oxidases signature 2. 535 546 IPR002355 GO:0005507
Glsi07g0708 572 CDD CuRO_1_LCC_plant 37 153 IPR034288 GO:0005507
Glsi07g0708 572 CDD CuRO_3_LCC_plant 417 555 IPR034289 GO:0005507
Glsi07g0708 572 Gene3D - 370 572 IPR008972 -
Glsi07g0708 572 PANTHER MULTI-COPPER OXIDASE 41 560 IPR045087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0708 Glsi-ChrGlsi07 6225484 6228340 Wgd