Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0702 ATGTATCGTTCCTATGACATGGACGGTGGGGGTTTGGATTTAGATTCACTGCCTCCAACCATTGTCGTCAAATGCCGATACCAACTGCGATCGGCATTCGACTCGTTTAGCATTGCCTCCGAAGCTTTTTCTGAGGATCATTGTTCTTTCATTCGGATTGTTGATCAGCGACGTGTGGGTGATATTGTGTTTGTGTTATATAGCCTTTTAGTTTTAAGTGGAAAATTACAAGTTGAGCTAGAGAGTTATAGGGGATTTGATGAAGTTGATGGGATAGAAGTTGCTTGGAATCAACTCTATGATTCTGGGATTGATGACAAGAACAGAACTATTAACATGATTACTGAGCTCTTCACATCTGGAAATTTGAGGCAATACCGTAAGAAGCATAAACATGTTGACATGAAGGACATAAAGGGTTGGGCTAGGCAGATTCTTCGAGGCTTAGTATATCTACATGGTCACAAGCCACCTATTATTCACAGAGACTTGAAACGTGACAACATTTTTGTGAATGGAAACCAAGGAGAAGTTAAGATAGGAGATCTTGGCTTGGCTATTGCCATGAAGCAGCCAACTGCTCAATGTGTCATTCATTGTGAATGCAAAAATCCGGCTCAGATATTTAAGAAAGTTACCTCTGGCATCAAACCTTCTTCCCTTAGTAAGGTGAAAGACTCCCAAATTAAGGAGTTTATTGAGAAATGCCTTTCTCCAGCCTCTGAGAGATTGTCTGCGGAGGAGCTTCTTAAAGACGAATTTTTTGCAAATGTTGAATACAAACAGGTTCCTATGAGTACCTGTACTGAAAGCAACTATGGAAGTGCACATTGTCCGGTTCTAGAATTCCAGAGGACAAGTAAGAACATTGAATTTAGGTTAAAGGGGACCAAAAATGATGATAACTCTGTATCATTGACCTTGCATATTGCTGCATGTGCTGAGCTTAGTGATTACTTGATAATGAAATTTCTGCCTGGGTGGAAGTCATCATCTGATTATTCCTCAAGTGCAGGAATAATGTTTCCCTCTGGATGGGTTATTGAGCAAGATGTTTTCTCTGGGCCAACTGCTGCTCCTCAAGACGGTTTTGTGACAGTTGAGGACAGCTGTTTGTGTGACAATACCGATAATGCTACTTTTCGAGGTGACTATTCTTCTTCTCCTAGTTTGGCTAACTTGGAAGATCAATATCCACTAGGATCTGCAGCTTCTGAGATTGTTGTGGAAGATGCATCCATGAAAAATGACAAGCTTCTTGATTTCAATTTTGATGGGAGCATTAAAGGCTTTAAGTACAAAGACATGGATCCTGAGCTAAGGTTGGAACTTGATGCAATTGAGGCACAGTATCAGCATTGGTTTAAAGAACTTTCTAGAATGAAATTGGAAGCATTCGAAACAACCAAAAGGAGACGAATGGCCAAGAAGAAACTGGCTGATTATGGAAATATGGAAAGAGATTCTGAAAGTGATATTGAATGTCAAAAAGCAATTTATGTCATACGTGATGGGGAGGCTTTAAACAGTGCTATTTATGCTCAACGGTTCCTTGTATTCATAGCTATTTTGGAACTTGATTCCCACACTATGTTGTTTGCTACTTGGCTTGTTCAAAATGAAGGAAATCTTAATGCTGGAATGCTAGCTGATGTTTCACCATGGGGAAAGTTTGGTTTTTCTCGAGTTGGGATCTTTGAGTTTTCCTTCCTCTTCAAGAAGACCAAGCTCTACAAGCAACAGAAGAACCAACCTTCTTCTTGTGGACTTTTAAGGTTTATGAGGAAACTCAAGAAGTATAAAGAAGGAAAATTCATACCAGAAAAGTTCAAGATCCTCAGGGGAAATCTTAAATAG 1857 0.3974 MYRSYDMDGGGLDLDSLPPTIVVKCRYQLRSAFDSFSIASEAFSEDHCSFIRIVDQRRVGDIVFVLYSLLVLSGKLQVELESYRGFDEVDGIEVAWNQLYDSGIDDKNRTINMITELFTSGNLRQYRKKHKHVDMKDIKGWARQILRGLVYLHGHKPPIIHRDLKRDNIFVNGNQGEVKIGDLGLAIAMKQPTAQCVIHCECKNPAQIFKKVTSGIKPSSLSKVKDSQIKEFIEKCLSPASERLSAEELLKDEFFANVEYKQVPMSTCTESNYGSAHCPVLEFQRTSKNIEFRLKGTKNDDNSVSLTLHIAACAELSDYLIMKFLPGWKSSSDYSSSAGIMFPSGWVIEQDVFSGPTAAPQDGFVTVEDSCLCDNTDNATFRGDYSSSPSLANLEDQYPLGSAASEIVVEDASMKNDKLLDFNFDGSIKGFKYKDMDPELRLELDAIEAQYQHWFKELSRMKLEAFETTKRRRMAKKKLADYGNMERDSESDIECQKAIYVIRDGEALNSAIYAQRFLVFIAILELDSHTMLFATWLVQNEGNLNAGMLADVSPWGKFGFSRVGIFEFSFLFKKTKLYKQQKNQPSSCGLLRFMRKLKKYKEGKFIPEKFKILRGNLK 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0702 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Glsi07g0702 618 SUPERFAMILY Protein kinase-like (PK-like) 98 255 IPR011009 -
Glsi07g0702 618 ProSiteProfiles Protein kinase domain profile. 1 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g0702 618 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 99 198 - -
Glsi07g0702 618 Gene3D Transferase(Phosphotransferase) domain 1 92 196 - -
Glsi07g0702 618 Gene3D Transferase(Phosphotransferase) domain 1 197 262 - -
Glsi07g0702 618 SMART serkin_6 53 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g0702 618 Pfam Protein kinase domain 107 193 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0702 Glsi-ChrGlsi07 6159948 6164958 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0702 83 480 MAP Kinase Kinase Kinase AT5G41990 35.917 1.41e-76 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Glsi07g0702 Pkinase 5.8e-20 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g0702 07 6159948 6164958 Glsi07g0702 07 6159948 6164958 ECH