Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0693 ATGACCACCCACATTGATAACCTCTGGATCTTTGCTCTGGCCTCCAAATGCACACACGAAAACATTGCATGGTCGCTTTTGATCATGGCTTTACTCTGGCTAACCATGACCTTCTTTTACTGGTCTCACCCTGGTGGTCCTGCTTGGGGAAAGTACTACTGCTATTACTACTACTGGAGAAAGACCACCACTACTCCTACTCCTACTCCTACTACTACTTCAGTCTCCTCTTCGTCTTCTTCTGCGAAAATGATTCCTGGTCCAAAAGGGTTGCCTCTGATTGGTAGCATGAGCCTGATGGTCTCGCTCGCCCACCACCGTATAGCAGCCGCCGCAACAGCATGCAAAGCCAGAAGACTCATGGCTATGAGCCTCGGGGATACACGAGTTATAGTCACGTGCCACCCTGACGTTGCCAAGGAGATCCTCAACAGCTCTGTGTTCGCCGATCGGCCCGTGAAGGAGTCGGCTTACAGCTTGATGTTCAATAGAGCAATCGGCTTCGCTCCTTATGGGGTCTACTGGCGAACCCTGAGGAGAATTGCCGCCACTCACCTCTTCTGCCCCAAGCAAATCAAAGCCTCCGAGTATCAGAGGTCCGAAATCGCCACCCAAATGGTGGAAATATTCAGAAACTACCGTGACCAGTACGGTTTCCGTGTTCGCGAGGTGCTCAAGAAAGCCTCGCTCAATAACATGATGTGCTCCGTGTTTGGACAACGGTATAGGCTAGACCAGTCAAACGGCGAAATGGAGGAGCTAAGAGGATTAGTAGACGAAGGGTACGACTTATTGGGTGCCCTTAATTGGGGGGACCACCTCCCTTGGCTTTCTGATGTTGATGCTCAGAAAATCCGGTTCAGATGCGCCAAACTCGTCCCTAAGGTGAACCGGTTCGTCAGTAAAATCATCGCCGACCACCGAGCCGAAAAGACCCAAACGACCCGGGATTTCGTTGACGTTTTGCTCTCCCTCCATGGACCCGACAAACTATCCGACTCCGACATGGTCGCCGTACTATGGGAAATGATATTTAGGGGGACTGACACGGTGGCAGTTTTGATCGAGTGGATACTAGCAAGGATGGTGCTTCATCCTGACATGCAATCTAGGGTTCAAGCCGAGCTTGATGCGGTGGTTGGGAAGTCACGCTCTGTCACGGAGGCGGACGTGACGGCGATGGTGTATTTACCGGCGGTGGTGAAGGAGGTGCTGAGGTTGCACCCACCTGGCCCTCTTCTCTCGTGGGCTCGCTTGGCTATCACCGATACAACCATTGATGGATATCATGTGCCTGAGGGGACCGTAGCCATGGTAAATATGTGGGCTATAGCCCGAGACCCAGATGTTTGGACGGACCCACTGGAATTTATGCCGGAGAGGTTTGTCACTAAAGAAGGAGATGTGGAATTCTCAATACTCGGGTCGGATCTTAGGCTGGCACCGTTCGGGTCGGGGAGAAGAACATGCCCGGGTAAGGCACTGGGCTTGGCTACTGTGAGTTATTGGGTGGCGTCCCTTTTGCATGAGTTCGAGTGGCTACCGTCGGATCAAAGCGAAGGAGTTGATTTATCAGAAGTGCTGAGACTGTCTTGTGAAATGGCTAGTCCTCTCACAGTTAGAGTGCGCCCCAGGCGTGGGTTAAGTTAA 1650 0.5218 MTTHIDNLWIFALASKCTHENIAWSLLIMALLWLTMTFFYWSHPGGPAWGKYYCYYYYWRKTTTTPTPTPTTTSVSSSSSSAKMIPGPKGLPLIGSMSLMVSLAHHRIAAAATACKARRLMAMSLGDTRVIVTCHPDVAKEILNSSVFADRPVKESAYSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQIKASEYQRSEIATQMVEIFRNYRDQYGFRVREVLKKASLNNMMCSVFGQRYRLDQSNGEMEELRGLVDEGYDLLGALNWGDHLPWLSDVDAQKIRFRCAKLVPKVNRFVSKIIADHRAEKTQTTRDFVDVLLSLHGPDKLSDSDMVAVLWEMIFRGTDTVAVLIEWILARMVLHPDMQSRVQAELDAVVGKSRSVTEADVTAMVYLPAVVKEVLRLHPPGPLLSWARLAITDTTIDGYHVPEGTVAMVNMWAIARDPDVWTDPLEFMPERFVTKEGDVEFSILGSDLRLAPFGSGRRTCPGKALGLATVSYWVASLLHEFEWLPSDQSEGVDLSEVLRLSCEMASPLTVRVRPRRGLS 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0693 549 SUPERFAMILY Cytochrome P450 85 545 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g0693 549 PANTHER CYTOCHROME P450 78A7-RELATED 1 546 - -
Glsi07g0693 549 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 483 492 IPR017972 GO:0005506|GO:0016705
Glsi07g0693 549 CDD CYP78 118 538 - -
Glsi07g0693 549 PRINTS E-class P450 group I signature 398 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g0693 549 PRINTS E-class P450 group I signature 440 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g0693 549 PRINTS E-class P450 group I signature 228 246 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g0693 549 PRINTS E-class P450 group I signature 355 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g0693 549 PRINTS E-class P450 group I signature 480 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g0693 549 PRINTS E-class P450 group I signature 335 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g0693 549 PRINTS E-class P450 group I signature 490 513 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g0693 549 FunFam Cytochrome P450 78A5 77 545 - -
Glsi07g0693 549 Pfam Cytochrome P450 86 520 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g0693 549 Gene3D Cytochrome P450 75 547 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g0693 549 PRINTS P450 superfamily signature 490 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g0693 549 PRINTS P450 superfamily signature 346 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g0693 549 PRINTS P450 superfamily signature 399 410 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g0693 549 PRINTS P450 superfamily signature 481 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0693 Glsi-ChrGlsi07 6085404 6087147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0693 1 546 Cytochrome P450 AT2G46660 66.364 0.0 735