Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0689 ATGGGCCAGTGCTACGGCAAGACTAATCCCACGTCGGGAAATGGCGCTGCGTCGAATGCAACCACCATTATCGTCGACTCCGGTGGGCGGCCACCGTCCCCGTTGCCTTCGGTGAAGAACACGCCTGCTCGGTCCTCGAGCACCAGCCCCTGGCCGAGTCCGTACCCGCATGGAGTCAACGCAAGCCCGTTGCCAGTTGGAGTTTCGCCGTCGCCTGCCAGGGCGTCGACGCCGAGAAGGTTTTTTCGGCGACCTTTTCCGCCGCCGTCGCCGGCGAAGCATATTAGAGCCTCGCTGGCAAAGCGGTTCGGGTACGCGAAGCCAAAGGAGGGTCCGATCCCCGAGGACGGTGGAACGGAGGCGGAGGCGGAGGCGGAGCAGGCGCTGAACAAGAGCTTTGGTTACAGTAAGAATTTTGGAGCTAAGTATGAGTTAGGGAAGGAAGTGGGAAGAGGGCATTTCGGTCATACGTGCTCTGCAACTGCTAAAAAAGGAGACCTCAAAGACCAGCCTCTAGCAGTTAAAATCATTTCAAAGGCCAAGATGACAACAGCAATAGCGATTGAAGATGCTCGTAGAGAGGTGAAGATGTTAAAATCATTATCTGGCCATAAACATCTCGTCAAATTTCATGATGCTTGTGAGGATGCCAATAATGTGTACATAGTTATGGAATTGTGTGAAGGTGGTGAGCTTCTTGACAGAATTTTGTCAAGGGGCGGAAGGTATACCGAGGACAAGGCGAAGGTTACAATTTTGCAGATTTTAAGTGTAGTTGCTTTTTGTCATCTTCAAGGGGTTGTGCACCGTGACCTGAAACCTGAGAATTTCCTTTTCACTTCAAGAAGTGAAGATGCTGATATGAAGCTTATTGATTTTGGTTTATCTGACTTCATCAAGCCAGATGAACGACTGAATGACATTGTGGGGAGCGCATATTATGTTGCGCCTGAGGTCCTTCACAGGTCATATAGTCATGAAGCAGATATATGGAGTATTGGTGTTATCACCTATATCTTGTTATGTGGAAGTCGACCTTTCTGGGCACGAACAGAATCCGGAATTTTCCGTTCAGTGCTCAGAGCTGATCCTAACTTTGACGACTTGCCTTGGCCTTCTGTATCTCCCGAGGCCAAAGACTTTGTAAAAAGGCTCTTAAATAAGGACTACAGGAAAAGACTAACTGCTGTCCAAGCTCTAACTCACCCTTGGTTGAGGAATGACAGCCACCCCATTCCTTTAGATATATTTATTTATAAATTAGTGAAGTCTTATCTTCATGCAACACCATTCAAACGGGCAGCACTAGAGGCCCTTTCAAAAGCCTTGACGGAGGACGAGTTGGTGTATCTACGAGCACAATTCAGATTGTTGGAACCAAATAGCGACGGGAAAATCTCCCTTGACAATTTTAAAAAGGCTCTTATGTGTAATGCGACCGATGCCATGCGGGAGTCAAGGGTTCTTGATATCATACAGAGGATGGAACCCCTTGCCTATAGAAAGATGGATTTTGAAGAATTTTGTGCAGCTGCAATAAGCACGTATCAGTTGGAGGCACTTGATAGGTGGGAGCATATTGCCACCACTGCATTTGAGCATTTTGAGAGACGAGGCAACCGTGTGATATCGGTGGAAGAACTAGGAAGAGAATTGAATCTTGGACCTTCGACTTATTCAATTCTCCGAGATTGGATACGAACGACCGATGGGAAGCTCAATTTACTGGGATATACTAAATTCTTGCATGGTGTGACTCTACGTAATTCAAACACAAGAAGAATGTCTTAA 1791 0.4724 MGQCYGKTNPTSGNGAASNATTIIVDSGGRPPSPLPSVKNTPARSSSTSPWPSPYPHGVNASPLPVGVSPSPARASTPRRFFRRPFPPPSPAKHIRASLAKRFGYAKPKEGPIPEDGGTEAEAEAEQALNKSFGYSKNFGAKYELGKEVGRGHFGHTCSATAKKGDLKDQPLAVKIISKAKMTTAIAIEDARREVKMLKSLSGHKHLVKFHDACEDANNVYIVMELCEGGELLDRILSRGGRYTEDKAKVTILQILSVVAFCHLQGVVHRDLKPENFLFTSRSEDADMKLIDFGLSDFIKPDERLNDIVGSAYYVAPEVLHRSYSHEADIWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFDDLPWPSVSPEAKDFVKRLLNKDYRKRLTAVQALTHPWLRNDSHPIPLDIFIYKLVKSYLHATPFKRAALEALSKALTEDELVYLRAQFRLLEPNSDGKISLDNFKKALMCNATDAMRESRVLDIIQRMEPLAYRKMDFEEFCAAAISTYQLEALDRWEHIATTAFEHFERRGNRVISVEELGRELNLGPSTYSILRDWIRTTDGKLNLLGYTKFLHGVTLRNSNTRRMS 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0689 596 SUPERFAMILY Protein kinase-like (PK-like) 142 427 IPR011009 -
Glsi07g0689 596 MobiDBLite consensus disorder prediction 1 93 - -
Glsi07g0689 596 SMART serkin_6 143 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g0689 596 FunFam Calcium-dependent protein kinase SK5 315 412 - -
Glsi07g0689 596 ProSiteProfiles EF-hand calcium-binding domain profile. 446 481 IPR002048 GO:0005509
Glsi07g0689 596 Gene3D - 413 585 - -
Glsi07g0689 596 FunFam CDPK-related kinase 3 135 307 - -
Glsi07g0689 596 MobiDBLite consensus disorder prediction 1 26 - -
Glsi07g0689 596 Gene3D Transferase(Phosphotransferase) domain 1 232 412 - -
Glsi07g0689 596 FunFam CDPK-related kinase 1 441 513 - -
Glsi07g0689 596 FunFam CDPK-related kinase 1 136 231 - -
Glsi07g0689 596 ProSiteProfiles Protein kinase domain profile. 143 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g0689 596 MobiDBLite consensus disorder prediction 39 55 - -
Glsi07g0689 596 ProSitePatterns Protein kinases ATP-binding region signature. 149 175 IPR017441 GO:0005524
Glsi07g0689 596 Pfam Protein kinase domain 143 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g0689 596 PANTHER SERINE/THREONINE-PROTEIN KINASE 127 562 - -
Glsi07g0689 596 ProSitePatterns Serine/Threonine protein kinases active-site signature. 267 279 IPR008271 GO:0004672|GO:0006468
Glsi07g0689 596 Gene3D Phosphorylase Kinase; domain 1 136 231 - -
Glsi07g0689 596 CDD STKc_CAMK 142 404 - -
Glsi07g0689 596 SUPERFAMILY EF-hand 431 583 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0689 Glsi-ChrGlsi07 6034476 6040393 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0689 37 589 EF-hand Containing Proteins AT3G50530 60.951 0.0 719
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Glsi07g0689 Pkinase 9.2e-69 CL0016