Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0672 ATGAAAGCAATGCTTGAGAAGGCACGGAATGAGTGCAGAATTAAAGATGAATCCATACAGAAACTAGAAGAAAATTTGCAGAACTTGGAAAGCAAAGCAAAAGGCAAGGATCATATTTACAGGAATCTACAAGAAACTATTAAAGAGCTTGAAGGCCAAATTGAGTTGAAGATAGTCATGCAAAAGCAATCAGAAAAGCAAGTTTCTGAATTGTCAGACAAATTGAAGGGAAAACAAGAAACCTGCAGTGCTCTCCAACATAAGTTGAAGCAAGCAAAAGGTATTATAATTCCAACGGATGCTGATGAAGTGAAAGTTGAACCATCCAATGATGAAGGAGGAGAAGGATCAACATCTTACAGGGCATCTGTCTGCTGTGATTACCAACCTGAGCTTCTAGCTGACCTAAGGCAGACTCTTGATGCCCTAAACTGCAAATGGTGA 444 0.3941 MKAMLEKARNECRIKDESIQKLEENLQNLESKAKGKDHIYRNLQETIKELEGQIELKIVMQKQSEKQVSELSDKLKGKQETCSALQHKLKQAKGIIIPTDADEVKVEPSNDEGGEGSTSYRASVCCDYQPELLADLRQTLDALNCKW 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0672 147 Coils Coil 5 88 - -
Glsi07g0672 147 PANTHER TRANSCRIPTION FACTOR BHLH30 85 146 IPR045847 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0672 Glsi-ChrGlsi07 5901515 5902970 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0672 96 146 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G41130 35.294 2.74e-06 43.5