Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0669 ATGAGTATATCTGTGAATGGACAATCTCAAGTCCCACCTGGCTTCCGCTTTCATCCAACCGAAGAGGAGCTCTTGCAGTACTACCTGAGGAAGAAGGTCTCCTACGAGAAGATTGACCTCGATGTCATTCGCGATGTTGATCTCAACAAGCTCGAGCCATGGGATATTCAAGAGAAGTGCAAAATAGGAACCACCCCACAAAACGATTGGTACTTCTTCAGCCACAAAGACAAGAAGTACCCCACTGGAACGCGTACCAACCGTGCCACGGCTGCCGGATTCTGGAAAGCCACTGGGCGTGACAAGGTGATATACAGCAACGGGAAGAGAATTGGAATGAGAAAGACTCTGGTTTTCTACAAAGGAAGAGCCCCACATGGCCAAAAGTCTGATTGGATCATGCACGAATACAGACTAGACGATAACACCACCGAAACCAATATTGTGTCCAATGTGATGGGAGATGGAGGGCAGGAAGAAGGATGGGTGGTGTGTAGGATATTCAAGAAGAAGAACCATCTGAAAACCCTAGACAGCCCCTTAGCTTCGTCCATTAGTACAGGAGAAAGTACTAGAAGAAGCCACATGTTTGATTCCTGCGTGGACGAGGGAGCCTTGGAGCAGATACTTCAGCAAATGGGAAGTAGTAGGAGTACTGCTTGTAAGGAAGAAAACGAAGCCAACAGTAATATTGCAAGATTCGCTAATATTAATGCTAGACCCTTTGACATAAACAGCGTCGTCAACAACATAAATATTGGCGGCGGCTCTTACCACCATCATGACAGGTTCATGAAACTCCCCAGCTTAGAGAGCCCAAAATCCACCAGCTTAGAGAATCATCAAAATAATGGTGGCTACCACCCCATTATTCCTGACATGGTCACAGACAACGAAGCTGGGTCATTCGGTGGCGGCGGCGGCGGCTCTGGCTTCACCAACTGGGCGGCTCTGGATAAGCTGGTGGCTTTTCAGCTGAATGGTCAGACCGAGGCTTCTAGGCAGCTAGCCTGCTTCAATGACCCCATAATGGGGGGTTATGGCATTAGTAACGACCATGATCTGCAAATGCCCACCCTACGATCTTCATCATCATCATCAACATCAACGCACAGCAGGGCTGCTAATTACATGACTTCCGCAACGCAGGACTATAGTGCCAGCGAGATTGACCTGTGGAACTTTGCCAGATCGACATCCTCATTATTGTCATCCTCGGAACCACTTTGCCACGTGTCGAACACGTCAGTGTAA 1254 0.4833 MSISVNGQSQVPPGFRFHPTEEELLQYYLRKKVSYEKIDLDVIRDVDLNKLEPWDIQEKCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYSNGKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDDNTTETNIVSNVMGDGGQEEGWVVCRIFKKKNHLKTLDSPLASSISTGESTRRSHMFDSCVDEGALEQILQQMGSSRSTACKEENEANSNIARFANINARPFDINSVVNNINIGGGSYHHHDRFMKLPSLESPKSTSLENHQNNGGYHPIIPDMVTDNEAGSFGGGGGGSGFTNWAALDKLVAFQLNGQTEASRQLACFNDPIMGGYGISNDHDLQMPTLRSSSSSSTSTHSRAANYMTSATQDYSASEIDLWNFARSTSSLLSSSEPLCHVSNTSV 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0669 417 Pfam No apical meristem (NAM) protein 12 139 IPR003441 GO:0003677|GO:0006355
Glsi07g0669 417 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 249 - -
Glsi07g0669 417 FunFam NAC domain-containing protein 20 174 - -
Glsi07g0669 417 SUPERFAMILY NAC domain 7 170 IPR036093 GO:0003677|GO:0006355
Glsi07g0669 417 ProSiteProfiles NAC domain profile. 11 170 IPR003441 GO:0003677|GO:0006355
Glsi07g0669 417 Gene3D NAC domain 20 175 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0669 Glsi-ChrGlsi07 5871029 5872632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0669 1 416 NAC Transcription Factor Family AT2G46770 54.976 6.43e-138 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi07g0669 NAM 3.8e-36 No_clan