Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0665 ATGTTCATAATGTCTCAACAAAGGCAATTCCAGATGGGGCAAAACAATGACTCAACTCTTACCAAAATCTTCGTTGGAGGGCTAGCTTGGGAAACTCAAAGGGACACAATGAGGAAGTATTTTGACCAGTTTGGAGAGATTCTTGAAGCTGTTGTTATCACAGACAAAAACACCGGGAGATCCAAGGGTTATGGCTTTGTAAGCCCATTTGCTTCCTTTGTGATTCTCGTCACATTTAAGGATCCAGAGGCAGCCATGAGAGCATGTCAGAACCCATCTCCAGTTATTGATGGGAGAAGAGCAAACTGCAATCTTGCATTTCTTGGTGCAAACAAGAATCGATCACCAACTCCTCAACATGGACGGTTCAGAGCAGGACCTGGAATGGCGGCTTCACCAGCTTATCATGGCTCTTCTTCGTCCTCAATGTTCCGTCAACCCACTGGGCAATACACATTTCCATATTCAGCTTACGGATATTCTGGATATTCACAAGACATCATGTATCCCATGAACTATTATAGTGTCTATGGAGGCCAGCAATTCTCACCTTACTACCCATCCACTGGGGCATCTGGTTTAATCAATAACATTTACCCTTTCTATGCTCAATATGCACAGAGGAATCAGGCTCATGGTTTTGGAGTTCAATATCCCCAAATGGTACAGTTTCCATTTCTGCATCAGCAGCACTATGGCTCTACTGGGATCCTGTCAATTCCTTCTTCATCAATGGAAATGCCAACTACTACTAGTGAAGTTGCAACAACAGCAGCAACAATGGCAGCAGCAACTAATGCAGGTTCAGGTGCTTCACAAGCCTCTGTTACAACTTCTGAACAAAACTTTTCAACTTAA 858 0.4347 MFIMSQQRQFQMGQNNDSTLTKIFVGGLAWETQRDTMRKYFDQFGEILEAVVITDKNTGRSKGYGFVSPFASFVILVTFKDPEAAMRACQNPSPVIDGRRANCNLAFLGANKNRSPTPQHGRFRAGPGMAASPAYHGSSSSSMFRQPTGQYTFPYSAYGYSGYSQDIMYPMNYYSVYGGQQFSPYYPSTGASGLINNIYPFYAQYAQRNQAHGFGVQYPQMVQFPFLHQQHYGSTGILSIPSSSMEMPTTTSEVATTAATMAAATNAGSGASQASVTTSEQNFST 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0665 285 Gene3D - 3 126 IPR012677 -
Glsi07g0665 285 CDD RRM_RBM24_RBM38_like 21 106 - -
Glsi07g0665 285 PANTHER BOULE-RELATED 13 259 - -
Glsi07g0665 285 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 21 68 IPR000504 GO:0003723
Glsi07g0665 285 SUPERFAMILY RNA-binding domain, RBD 11 127 IPR035979 GO:0003676
Glsi07g0665 285 SMART rrm1_1 22 104 IPR000504 GO:0003723
Glsi07g0665 285 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 23 67 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0665 Glsi-ChrGlsi07 5830353 5831781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0665 15 106 C2H2 Transcription Factor Family AT2G19380 36.957 1.89e-12 65.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g0665 07 5830353 5831781 Glsi07g0665 07 5830353 5831781 ECH