Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0664 ATGAGCCCTCAAACCCTAGAATCGCATAGCAGCCGCGGGGCAAATTGCAGGGAGTCACTGGTCTCTGATCACATTTGCTTGAGTGTAAAAATGTCGCTTGGAGAGCTTGCTTGCGGCTACGCGACTATGATCCTTCATGATGATAGCATTGCTGTCACTTCCGAGAAGATCTCAACCTTGGTGAAAGCAGCAAATGTTGAGATTGAATCTTATTGGCCAAGCTTATTTGCTAAACTTGCCGAGAAGCGAAACATTGAGGATTTGATATTGAATTCTGGAGGTGGTGGGGCTCCAGTTGCTGTGGCCGCCCCAGCTGCTGCTGTTTCTGGTGGTGGAGGTGCTTCTGCTGCTCCTCCTCCTCCTGCTGAGGAGAAGAAGAAGGAAGAACCCCAGGAAGAGAGCGATGATGACATGGGATTCAGCTTGTTTGATTAG 435 0.4943 MSPQTLESHSSRGANCRESLVSDHICLSVKMSLGELACGYATMILHDDSIAVTSEKISTLVKAANVEIESYWPSLFAKLAEKRNIEDLILNSGGGGAPVAVAAPAAAVSGGGGASAAPPPPAEEKKKEEPQEESDDDMGFSLFD 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0664 144 Pfam 60s Acidic ribosomal protein 52 143 - -
Glsi07g0664 144 Gene3D - 31 93 IPR038716 -
Glsi07g0664 144 FunFam 60S acidic ribosomal protein P1 31 93 - -
Glsi07g0664 144 Hamap 50S ribosomal protein L12 [rpl12]. 36 144 IPR027534 GO:0003735|GO:0005840|GO:0006414
Glsi07g0664 144 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 31 144 - -
Glsi07g0664 144 MobiDBLite consensus disorder prediction 108 144 - -
Glsi07g0664 144 CDD Ribosomal_P1 35 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0664 Glsi-ChrGlsi07 5826115 5827030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0664 31 144 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 56.667 3.06e-37 121