Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0657 ATGGGTGAAGTGGCGGTGGCAAGGGGTGAAGAGGGGATGGAGGTGAGGTTGGGGACAGAAGAGGAGGATCAGACTAAGAAGATGGTTAGGTGGGAAAAGTTTCTGCCGCAAATGGCGCTCAGAGTACTGCTTGTGGAACCGGATGATTCTACTAGTCAGATTATCGCCGCCCTTCTACGCAAGTGCAGTTACAGAGTTGCCGCAGTTCCTGATGGATTAAAGGCATGGGAGACATTGAAGAGGAAAGCTTCTGAGATTGATCTCATATTAACAGAAGTGGAGCTGCCATCAATATCTGGATTTTCACTTCTTAGTTTAATCATGGAGCATGATATTTGCAAGAACATTCCTGTCATAATGATGTCCTCTCATGACTCAACTAGCATGGCATTGAAATGCATTTTGAAAGGTGCAGCTGATTTTCTTATAAAACCTGTTCGGAGGAATGAGCTAAGGAACTTGTGGCAACATGTATGGAGAAGAAATGAGATTAGCAGGCAACCTCAAAATATGACATTTCCATGGAAAAAGTTTGAGGCTACTTCAGAAAATACTGCTGAAAGCAATCATTCTAGTGGTTCTGAGGCTTCCAGACAGAAAAATAATGAAGGAAGTGAGAAATGGAGTGATGCCCAAAGCACTTGTACATCGCCATTTTTGGAAGCTGAGAGTGCATACATGCAAAACATGCAGGGTACATCCGATCTGAAGAGTTCTTCAAATTTGAACAACATTGACACAATGCAGCATGGAGAATCATCCAAATTGGAAAGGGAATCAGTTAAGAATAACAATGAAATGGGAGAGAAGTCAATGACATTTTTATCACAAGCCACAAAGTGCAACAAAACTTTTAATTCGACTGATCGAAGTCAGGAACAATGCTATGATTGTGCTGAAACAGAGAATCAAGATGAGGTTTTAAGAGCAGAGTTAAGCAGAGGCCATCCTAATATAAATCCAGAGATTCATGGCTGCAATAATGAACTGGTAGAACCTTCTAGAGGAGCTATTGACTTGATTGCCACATTCAAGAATTTTCCAGATAATTATGATGAAAATTTTAGTCTCAATGGTGGTGCTACAAACAATTTTAATTTTAATCCACAATTGGAACTTTCTTTAAGAAGAGACTTTCCTGGCAGCTCATGTAAACAAGCAACTGAGGAAAACCAACCATTGAACCATTCAAACACGTCCGCCTTTTCTTGGTATAGTGGTTGTAAGTTGTTGCAGCCTCTCTTTCCCACACCATCAATTAGTTCTGCTAAAGTAAACAACACGCAGTGGAATTCTCATGAATCCAATATATTATCTGGAAATAACGTTGATACTTCTCATCAGTATGGTGGCACTGATCATAGTCAGGTGAATATGACAACTCTCGCCATTGTTCAGTCTGGACAAGTTGAACTACACTTGCCAAAAAGTCAACTTGGACCATTTCCTGCTACTGGGGCTACTTCTGATCCGAAGTCTCCTGGATCTGGTGATGTCTTCTCTTCTATGTTCTACACACAACCTGGTGTTCATTCCATATTGAGTCCTAAACCAGTCTGCCAGAAAGAAAGTTCTCCCTTTCCCACAAGAAACTCTTTCCACTCCAATCCTGAAAATTACGACTTAGAACAACATTATCGCTGTTCTGATGATGCCACCTGCACATCTCTTAGTCAAACAGTACGTGATAAAAGCAAATTGGGTTCTGCAAGGCAAGATTCTCTTGCTGCTGATCAGAGCACCAGTAATAGTTTATGCCATGACACTGCAAATCATAATAATAATAGTGCATATAGAAGCATTGGCAGAACTGATGGAAATGCTACTTCAGCTGTGGTAGTTGAGAGCAACCCTCAAAGTTTTGGTGACAGTGGTAGTCATAATTATGATGGGTTTAGAGGGACAGATTCTCATCGCTCCAGTCAAAGAGAAGCGGCTCTAACAAAGTTTCGACAGAAGCGGAAAGACAGATGCTATGAGAAAAAGGTCCGATATCAAAGCAGGAAAAGATTGGCAGAACAGCGCCCTCGGGTGAAAGGGCAGTTTGTACGCCAAGTAAACAATGATCAAAAGTTTGTACACCAATGCTAG 2091 0.4127 MGEVAVARGEEGMEVRLGTEEEDQTKKMVRWEKFLPQMALRVLLVEPDDSTSQIIAALLRKCSYRVAAVPDGLKAWETLKRKASEIDLILTEVELPSISGFSLLSLIMEHDICKNIPVIMMSSHDSTSMALKCILKGAADFLIKPVRRNELRNLWQHVWRRNEISRQPQNMTFPWKKFEATSENTAESNHSSGSEASRQKNNEGSEKWSDAQSTCTSPFLEAESAYMQNMQGTSDLKSSSNLNNIDTMQHGESSKLERESVKNNNEMGEKSMTFLSQATKCNKTFNSTDRSQEQCYDCAETENQDEVLRAELSRGHPNINPEIHGCNNELVEPSRGAIDLIATFKNFPDNYDENFSLNGGATNNFNFNPQLELSLRRDFPGSSCKQATEENQPLNHSNTSAFSWYSGCKLLQPLFPTPSISSAKVNNTQWNSHESNILSGNNVDTSHQYGGTDHSQVNMTTLAIVQSGQVELHLPKSQLGPFPATGATSDPKSPGSGDVFSSMFYTQPGVHSILSPKPVCQKESSPFPTRNSFHSNPENYDLEQHYRCSDDATCTSLSQTVRDKSKLGSARQDSLAADQSTSNSLCHDTANHNNNSAYRSIGRTDGNATSAVVVESNPQSFGDSGSHNYDGFRGTDSHRSSQREAALTKFRQKRKDRCYEKKVRYQSRKRLAEQRPRVKGQFVRQVNNDQKFVHQC 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0657 696 MobiDBLite consensus disorder prediction 518 538 - -
Glsi07g0657 696 PANTHER TWO-COMPONENT RESPONSE REGULATOR 40 327 IPR045279 GO:0009736
Glsi07g0657 696 MobiDBLite consensus disorder prediction 572 586 - -
Glsi07g0657 696 CDD psREC_PRR 42 145 - -
Glsi07g0657 696 MobiDBLite consensus disorder prediction 232 250 - -
Glsi07g0657 696 MobiDBLite consensus disorder prediction 561 586 - -
Glsi07g0657 696 MobiDBLite consensus disorder prediction 180 199 - -
Glsi07g0657 696 SUPERFAMILY CheY-like 40 172 IPR011006 -
Glsi07g0657 696 SMART REC_2 40 155 IPR001789 GO:0000160
Glsi07g0657 696 ProSiteProfiles CCT domain profile. 643 685 IPR010402 GO:0005515
Glsi07g0657 696 MobiDBLite consensus disorder prediction 232 261 - -
Glsi07g0657 696 Pfam Response regulator receiver domain 42 153 IPR001789 GO:0000160
Glsi07g0657 696 MobiDBLite consensus disorder prediction 476 496 - -
Glsi07g0657 696 Pfam CCT motif 643 685 IPR010402 GO:0005515
Glsi07g0657 696 Gene3D - 38 292 - -
Glsi07g0657 696 ProSiteProfiles Response regulatory domain profile. 41 159 IPR001789 GO:0000160
Glsi07g0657 696 MobiDBLite consensus disorder prediction 180 214 - -
Glsi07g0657 696 MobiDBLite consensus disorder prediction 517 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0657 Glsi-ChrGlsi07 5794794 5799766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0657 638 690 Response Regulator Gene Family AT5G24470 81.132 2.18e-20 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Glsi07g0657 Response_reg 2e-21 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g0657 07 5794794 5799766 Glsi07g0657 07 5794794 5799766 ECH