Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0655 ATGCATGCCCAAGCTCAAAGTGAAGTGTCTAGCAATAGTAATATGGAAGCACAAAGCACTCGGCAGGCACAAATTATTGAAATTGATGAAAAAAGAAACCTGGGAGGAACTAAGATTTGTGGGGAAGCACCATGTGGGTTTTCAGATGCTGGTTCCATCTCTAAGGATTCAAAAGAACGATCAACTTCAATGCGAAAGCTTTTGATGGCTGTGGTTCTTTGTGTTATTTTCATGAGCGTTGAAGTAGTTGGTGGCATCAAAGCTAATAGTCTTTCAATATTGACTGATGCAGCACATTTGCTTTCAGATGTTGCAGCCTTTGCTATCTCCTTATTCTCTTTATGGGCTGCTGGATGGGAAGCCACACCTCGTCAATCATATGGATTTTTTAGGATAGAGATTCTTGGTGCTTTGGTTTCTATCCAGCTAATATGGTTGCTTGCCGGGATTCTGGTATATGAAGCTATTGAAAGAATTATTGATGGTACCCATAAGGTGAATGGCTTTCTAATGTTTGTGGTTGCTGCATTTGGTCTAGTGGTTAATATCATAATGGCTTTATTATTGGGTCACGATCATGGCCATGGCCATGGCCATGGACATGATGAACATGATCATGGCCACAGCCATGGCCATGGAGTTATAGTGTCTACCCATCATGATCATCATCAAAAAGATGAGCACCATCATACTCATGGAGGTCACTGCATACACCATCATGATCATCAACATCATCATGGTGATACACATCCCGAAGATGAGCACCATCATTCTCATGAAGATGTTACTGAACCACTTCTCAGCGCATCAAAAGGTAGACCTCAAAAGAAGAAGCGATGGAACATAAATGTACAGGGTGCGTATCTCCATGTACTTGGAGACTCTATCCAGAGTGTTGGAGTAATGATAGGGGGAGCAATCATTTGGTATAAACCTGAGTGGCATATAGTTGATTTAATTTGCACTCTTATATTCTCAGTAATTGTTCTGGGGACAACTATCAATATGCTGCGAAACATACTCGAAGTCCTGATGGAGAGCACACCACGCGAGATAGATGCAACACAGCTTGAAAGGGGGCTGCTTGACATGGATGAAGTAGTGGCTGTTCATGAGCTGCATATATGGGCAATCACAGTGGGGAAGGTTTTGCTGGCTTGTCATGTTAAAATCATGCCAGAAGCAAATGCAGACATGGTGCTGGACAAGGTTATAGACTATATCAGAAGGGTTTATAACATCAGTCATGTAACTATACAGATAGAGCGCTAG 1272 0.4206 MHAQAQSEVSSNSNMEAQSTRQAQIIEIDEKRNLGGTKICGEAPCGFSDAGSISKDSKERSTSMRKLLMAVVLCVIFMSVEVVGGIKANSLSILTDAAHLLSDVAAFAISLFSLWAAGWEATPRQSYGFFRIEILGALVSIQLIWLLAGILVYEAIERIIDGTHKVNGFLMFVVAAFGLVVNIIMALLLGHDHGHGHGHGHDEHDHGHSHGHGVIVSTHHDHHQKDEHHHTHGGHCIHHHDHQHHHGDTHPEDEHHHSHEDVTEPLLSASKGRPQKKKRWNINVQGAYLHVLGDSIQSVGVMIGGAIIWYKPEWHIVDLICTLIFSVIVLGTTINMLRNILEVLMESTPREIDATQLERGLLDMDEVVAVHELHIWAITVGKVLLACHVKIMPEANADMVLDKVIDYIRRVYNISHVTIQIER 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0655 423 Gene3D Cation efflux protein transmembrane domain 63 344 IPR027469 -
Glsi07g0655 423 MobiDBLite consensus disorder prediction 1 20 - -
Glsi07g0655 423 MobiDBLite consensus disorder prediction 195 277 - -
Glsi07g0655 423 SUPERFAMILY Cation efflux protein transmembrane domain-like 61 346 IPR027469 -
Glsi07g0655 423 MobiDBLite consensus disorder prediction 195 231 - -
Glsi07g0655 423 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 26 423 - -
Glsi07g0655 423 MobiDBLite consensus disorder prediction 245 266 - -
Glsi07g0655 423 NCBIfam cation diffusion facilitator family transporter 64 423 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Glsi07g0655 423 Pfam Cation efflux family 67 345 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Glsi07g0655 423 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 352 422 IPR036837 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0655 Glsi-ChrGlsi07 5782538 5786018 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0655 15 423 Inorganic Solute Cotransporters AT2G46800 72.356 0.0 523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g0655 07 5782538 5786018 Glsi07g0655 07 5782538 5786018 ECH