Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0649 ATGGCCAATTCAGAGAGTCAACTAAAGCAACCAGAAGCACCAGAAACAGAGGAAGAAGAAAACTTCTCCTCCGCTATGCAGCTGGTCAGTTCTACTGTGCTTTCCATGTCGATGCAAACGGCAACCAAGCTCGGCATTTTCGACATCATAGACAAAGCTGGTCCGGGCGCCAAGCTCTCTGCCCTGGAAATTGCGTCCAAGCTTTCTTGCAAGAACCCAGAAGCACCGTCCTTGCTGGATCGGCTTCTCAGGCTTCTGGTATCTCACTCTGTGCTTCATTGTTCCGTAGTTGACGCCGATGATCAAGAACTGGGATCCTTCCAGAGGCTCTACGGCCTCGCTCCTATCGCCAAATACTTTGTGCGCGATGCTGATGGTGTGTCATTGGGGCCCTTGATGGCGTTGTTTCAAGATAGGGTCTTCCTCGATAGTTGGTCCCACATGACAGATGCAATTTTGGAAGGCGGTATTGCATTCAATAGGGCTCATGGCACTCACGCCTTTGAGTATCTGAGCTTGGATTCAAGGTTCAATGAGGTTTTTAACGAGGCAATGGTGAGTCATACCACTTTTGTGACGAAGAAAATTGTTGAATCCTACAAAGGTTTTGAAGGCATCAATAGACTTGTAGATGTGGGTGGTGGTCTTGGGAGGACTCTTAACTTGATCACTACGAAATACCCTCATATTCAGGGTATCAATTTCGACTTGCCTCATGTAATAAAGCATGCTACTCCCTATCCTGGAGTGGAACACATGGGAGGAGATATGTTCGAAAGTGTGCCTAAAGGAGATGCCATCTTTATGAAGGGAATACTTCATGATTGGAGTGATGAAAGTTGCTTGAAGCTGTTGAAGAACTGCTATAATGCTATTCCTAATGATGGAAAGGTAATTGTTGTGGAGTTATTTCTTCCCATTATACCAGAGACTACTAATGCTATGAAGAGAACCTGCCAACTAGATGTTAATATGATGACTCAGCACCCGGGAGGCAAAGAGCGAACTGAAAAAGAATTTATGGAACTTGCTACAGCAGCTGGATTTAGTGGCATTAAATACGATTGCTTTGTTCGTAACTTCTGGGTTATGGAGTTCGTAAAGTAA 1107 0.4508 MANSESQLKQPEAPETEEEENFSSAMQLVSSTVLSMSMQTATKLGIFDIIDKAGPGAKLSALEIASKLSCKNPEAPSLLDRLLRLLVSHSVLHCSVVDADDQELGSFQRLYGLAPIAKYFVRDADGVSLGPLMALFQDRVFLDSWSHMTDAILEGGIAFNRAHGTHAFEYLSLDSRFNEVFNEAMVSHTTFVTKKIVESYKGFEGINRLVDVGGGLGRTLNLITTKYPHIQGINFDLPHVIKHATPYPGVEHMGGDMFESVPKGDAIFMKGILHDWSDESCLKLLKNCYNAIPNDGKVIVVELFLPIIPETTNAMKRTCQLDVNMMTQHPGGKERTEKEFMELATAAGFSGIKYDCFVRNFWVMEFVK 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0649 368 SUPERFAMILY "Winged helix" DNA-binding domain 16 123 IPR036390 -
Glsi07g0649 368 MobiDBLite consensus disorder prediction 1 22 - -
Glsi07g0649 368 PANTHER O-METHYLTRANSFERASE 25 353 IPR016461 GO:0008168
Glsi07g0649 368 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 125 366 IPR029063 -
Glsi07g0649 368 Pfam O-methyltransferase domain 145 350 IPR001077 GO:0008171
Glsi07g0649 368 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 26 368 IPR016461 GO:0008168
Glsi07g0649 368 Pfam Dimerisation domain 36 87 IPR012967 GO:0046983
Glsi07g0649 368 FunFam Caffeic acid 3-O-methyltransferase 3 120 - -
Glsi07g0649 368 PIRSF O-mtase 2 368 IPR016461 GO:0008168
Glsi07g0649 368 FunFam Caffeic acid O-methyltransferase 121 368 - -
Glsi07g0649 368 Gene3D - 2 120 IPR036388 -
Glsi07g0649 368 Gene3D Vaccinia Virus protein VP39 121 368 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0649 Glsi-ChrGlsi07 5746795 5750009 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0649 25 368 Monolignol Biosynthesis Gene Families AT5G54160 54.046 1.19e-136 392