Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0648 ATGGCCAATTCAGAGAGTCAACTAAAGCAACCAGAAGCACCAGAAACAGAGGAAGGAGAAAACTTTTCCTATGCTTTTCAGCTGGCCAGTTCTACTGTGCTTTCCATGTCGATGCAAACGGCAACCAAGCTCGGCGTTTTCGACATCATAGACAAAGCAGGTCCGGGCGCCAAGCTCTCTGCCCTGGAAATTGCGTCCAAGCTTTCTTGCAAGAACCCAGAAGCACCGTCCTTGCTGGATCGGCTCCTCAGGCTTCTGGCATCTCACTCTGTGCTTCATTGTTCCGTAGTTGCCGCCGATGATCAAGAACTGGGATCCTTCCAGAGGCTCTACGGACTCGCTCCTGTCGCCAAATGCTTTGTGCGCGATGCTGATGGTGTGTCATTGGGCTCCTTGACGGCGATGTTTCAAGATAGGGTCTTCCTCGATAGTTGGTCCCACATGACAGATGCAATTTTGGAAGGCGGTATTGCATTCAATAGGGCTCATGGCACTCACGCCTTTGAGTATCTGAGCTTGGATTCAAGGTTCAATGAGGTTTTTAACGAGGCAATGGTGAGTCATACCACTTTTGTGACGAAGAAAATTGTTGAATCCTACAAAGGTTTTGAAGGCATCAATAGACTTGTAGATGTGGGTGGTGGTCTTGGGAGGACTCTTAACTTGATCACTACGAAATACCCTCATATTCAGGGTATCAATTTCGACTTGCCTCATGTAATAAAACATGCTACTCCCTATCCTGGAGTGGAACACATGGGAGGAGATATGTTTGAAAGTGTGCCTAAAGGAGATGCCATATTTATGAAGGGAATACTTCATGATTGGAGTGACGAAAGTTGCTTGAAGCTGTTGAAGAACTGCTATAATGCTATTCCTAATGATGGAAAGGTGATTGTTGTGGAGTTCGTTCTTCCCATTATACCAGAGAAGACTATTGCTATGAAGGGAACCTTCCAACTAGATGTTCATATGATGACTCAGCACCCGGGTGGCAAAGAGCGAACTGAACAAGAATTTATGGAACTTGCTACAGAAGCTGGATTTAGTGGCATTAAATATGATTGCTTTGCTTGTAACTACTGGGTTATGGAGTTCTTCAGGTAG 1107 0.4562 MANSESQLKQPEAPETEEGENFSYAFQLASSTVLSMSMQTATKLGVFDIIDKAGPGAKLSALEIASKLSCKNPEAPSLLDRLLRLLASHSVLHCSVVAADDQELGSFQRLYGLAPVAKCFVRDADGVSLGSLTAMFQDRVFLDSWSHMTDAILEGGIAFNRAHGTHAFEYLSLDSRFNEVFNEAMVSHTTFVTKKIVESYKGFEGINRLVDVGGGLGRTLNLITTKYPHIQGINFDLPHVIKHATPYPGVEHMGGDMFESVPKGDAIFMKGILHDWSDESCLKLLKNCYNAIPNDGKVIVVEFVLPIIPEKTIAMKGTFQLDVHMMTQHPGGKERTEQEFMELATEAGFSGIKYDCFACNYWVMEFFR 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0648 368 Gene3D Vaccinia Virus protein VP39 121 368 IPR029063 -
Glsi07g0648 368 Pfam O-methyltransferase domain 145 350 IPR001077 GO:0008171
Glsi07g0648 368 SUPERFAMILY "Winged helix" DNA-binding domain 17 123 IPR036390 -
Glsi07g0648 368 PANTHER O-METHYLTRANSFERASE 28 353 IPR016461 GO:0008168
Glsi07g0648 368 Pfam Dimerisation domain 36 87 IPR012967 GO:0046983
Glsi07g0648 368 PIRSF O-mtase 2 368 IPR016461 GO:0008168
Glsi07g0648 368 FunFam Caffeic acid 3-O-methyltransferase 3 120 - -
Glsi07g0648 368 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 26 368 IPR016461 GO:0008168
Glsi07g0648 368 FunFam Caffeic acid O-methyltransferase 121 368 - -
Glsi07g0648 368 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 126 366 IPR029063 -
Glsi07g0648 368 Gene3D - 2 119 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0648 Glsi-ChrGlsi07 5737379 5740580 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0648 2 368 Monolignol Biosynthesis Gene Families AT5G54160 51.491 4.18e-136 390