Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0645 ATGGCTCAATCAGAGGAAACCCCGCAAAAGCATCTCCATGGCGAAGGGGATCAACCAATTAAGCAGCAACAAGCACCAGAAATTGTGGAAGAAGAAAGCTTCTTGTATGCTATGCGGCTGGTGAATTCCACTGTGCTTTCCATGTCGATGCAAACGGCAACCGAGCTCGGCGTTTTCGACATCATAGACAAAGCGGGCCCAGATGCCAAGCTTTCTGCCATGGACATTGCGTCCAAGCTTTCTTTCAACAACCCGGACGGTGCGTCCATGCTGGATCGGGTCCTTAGGCTTCTGGCATCGCACTCTGTGCTTCACTGTTCCGTAGTTGCTGCCGACGGCGACAATCAACAACCAGGGACTTTCCAAAGGCTGTACGGACTCGCTCCTGTGGCCAAATTTTTTGCGCGCAACAATGATAATGCGTCGTTGGGCCCCTTGATGGCCTTGACTCAGGATAGGGTCTTTCTGGAGAGCTGGGCCCAGCTGAAAGATGCAATTTCGGAAGGTGGTATTGCATTCAATAGGGTTCATGGCTCACATGCGTTTGAGTATCCGAGCTTGGACTCAAGGTTCAATGAGGCTTTTAACAAGGCAATGGTGAATCATACTACTTTAGTTGTGAAGAAGATTCTTGAATCCTACAAGGGTTTTGACGACATCAAAAGGCTTGTGGATGTGGGTGGTGGTCTTGGGATTACTCTTAACTTGATCACTTCGAAATACCCTCATATTCAGGGTATCAATTTCGACTTGCCTCATGTCATAGAACATGCTCCTTCCTATCCTGGAGTGGAACACGCGGGAGGAGATATGTTTGAAAGTGTGCCTAAAGGAGATGCCATCTTTATGAAGTGGATCCTCCATGATTGGAGCGATGAAAGGTGCTTGAAGCTGTTGAAGAACTGCTATAATGCTATTCCTGATGATGGAAAGGTGATTGTTGTGGAGGCAGTTCTTCCCATTATACCAGAGGCTAGTGCTGCTGTGAAAAGCACCTCCCAACTTGATGTTCTTATGATGACTCAAAACCCAGGAGGTAAAGAGAGAAGTGAACAAGAATTCATGGAACTTGCAACAGAAGCTGGATTTGGTGGTATTAGATATGAATGCTTTGTTCGTAATTTCTGGGTTATGGAGTTCTTCAAGTAG 1149 0.4682 MAQSEETPQKHLHGEGDQPIKQQQAPEIVEEESFLYAMRLVNSTVLSMSMQTATELGVFDIIDKAGPDAKLSAMDIASKLSFNNPDGASMLDRVLRLLASHSVLHCSVVAADGDNQQPGTFQRLYGLAPVAKFFARNNDNASLGPLMALTQDRVFLESWAQLKDAISEGGIAFNRVHGSHAFEYPSLDSRFNEAFNKAMVNHTTLVVKKILESYKGFDDIKRLVDVGGGLGITLNLITSKYPHIQGINFDLPHVIEHAPSYPGVEHAGGDMFESVPKGDAIFMKWILHDWSDERCLKLLKNCYNAIPDDGKVIVVEAVLPIIPEASAAVKSTSQLDVLMMTQNPGGKERSEQEFMELATEAGFGGIRYECFVRNFWVMEFFK 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0645 382 Gene3D Vaccinia Virus protein VP39 135 382 IPR029063 -
Glsi07g0645 382 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 139 380 IPR029063 -
Glsi07g0645 382 Pfam O-methyltransferase domain 159 363 IPR001077 GO:0008171
Glsi07g0645 382 SUPERFAMILY "Winged helix" DNA-binding domain 31 138 IPR036390 -
Glsi07g0645 382 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 38 382 IPR016461 GO:0008168
Glsi07g0645 382 FunFam Caffeic acid O-methyltransferase 135 382 - -
Glsi07g0645 382 PIRSF O-mtase 16 382 IPR016461 GO:0008168
Glsi07g0645 382 Gene3D - 15 134 IPR036388 -
Glsi07g0645 382 FunFam Caffeic acid 3-O-methyltransferase 17 134 - -
Glsi07g0645 382 CDD AdoMet_MTases 222 315 - -
Glsi07g0645 382 MobiDBLite consensus disorder prediction 1 25 - -
Glsi07g0645 382 Pfam Dimerisation domain 48 99 IPR012967 GO:0046983
Glsi07g0645 382 PANTHER O-METHYLTRANSFERASE 37 367 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0645 Glsi-ChrGlsi07 5725308 5727478 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0645 22 382 Monolignol Biosynthesis Gene Families AT5G54160 51.801 6.84e-141 403