Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0640 ATGGACGCGTACTCCTCTGGAGAAGAAGTGGTTGTTAAGAGTAGAAAACCATATACAATCACAAAGCAAAGAGAAAGATGGACAGAAGAGGAGCATAATAGGTTTCTAGAAGCTATAAAGCTTTATGGGAGAGCATGGCAGCGCATAGAAGAGCATATAGGAACAAAGACTGCTGTGCAAATCAGGAGCCATGCACAGAAATTCTTTTCAAAGTTGGAGAAAGAGGCCCTCGTAAAGGGTGTTCCAATAGGACAAGCGCTTGACATAGACATCCCTCCTCCACGGCCAAAAAGAAAACCAAGCAATCCTTATCCTCGGAAGGCCAGCGTTGGTTCGCCAACATCACATAATGGAGCAAAGGATGGAAAACTTCTCTTATCAGTTTCATCTTCACATGGTAAACAAGCACTGGACTTAAAGAAAGAGCCACTTCCAGAGAAACCTAATGGAGATGAAAGGCCTACCAATATTAAAGAAAATAAGGATGAGAACTGCTCAAAAGTATTTACTATTATCCAGGAGACACCCTGTTCCTCTGTATCTTCAGCAAACAAGAATTCAATGTCAGTTTCAGTACCACTGAGAAATTCATGCATCTTAAGGGAGTTCATACCTTCAGTAAAAGAGGCAATTACTCAAGATGAAACAAATAATTCTTGTGTCACTATTGAACTTGAAAATCAGAAGTGTAAGATATATGACGGCAGACTAAGAGAACAGATTAATGGCACAATTAAAGCCTCTAATTTGGAGAATTCTGATGCTTCAGGTGTGAAATTGGTTCAAAGTAAGAAAACAGATGATCTTGACTGTGCAATAACAACAGATGGGATGCAAGGCAATCAGAGTTACCCAAGGCATGTCCCTGTGCACGTTCTTGATGGGAATCTTGGAACAAGTACTGAAAATCCATCCCAAGATATTTTGTTTCAAGACTCCATATTTCAGCCATTGGGAGGGGTTAATGGGCAACCTAATCTTTTCACAGATTCAGTGGCATCGAACACAAGTAAGAATAACACTACAGGATCTTCTATTCATCAATTATTTCCTGCTTATCTTCCCTTCACCCAAGTCCTCCATAGTCAAGATGATTACCATTCACTTCTTCACATGTACTCCACATTTTCAAGTCTTATTGTCTCCACCCTGCTACAAAATCCTGCAGCCCATGCTGCAGCAAGTTTTGCTGCTACATTTTGGCCCTATGCAAATGCAGAGACTTCTGCAGATTCTCCTGCTTGCTCTCAAGGAGGCTTTCAATCCAAACAAATTGGCTCTCCTCCAAATATGGCAGCAATTGCAGCTGCTACTGTAGCTGCTGCAACTGCATGGTGGGCAGCCCATGGATTGCTTCCTTTGTGTGCTCCACTGCATTCTGCTTTTGCCCGTCCTGCTGCACCCGCGGTGGCAGTTCCATCAAAGGATACTGGCGAAGTAACAACAGCAAAGGAAGAGCAAAGAGAGACTCCCCTCCAGAATCCTCCTCCACAAGATCAGATACTGGATCCAGCATATTCAGAAGCTCTGCAAGCTCAACATTCAGCTTCTAAGTCACCAGCTGTTTCTTCATCAGAGTCTGAGGAGAGCGGAGATGTCAAGTTAGTTACCTCATCAAAGGCTGCTGATCATGACAAGAACAAGGCAATTTCCGAGCACCTTGATTCCAACATAACCAAGGGAAGAAAACCAGTAGACCGTTCTTCATGTGGCTCCAACACAGCCTCTAGCAGCGATGTAGAGACAGATGCATTAGAGAAGGACCAGAAAGGGAAGGAAGAGTCCATAACTCCAGATGCAACAAACCATTTAGCCACTGAACCCGGTAATCGTCGTAGTAGGAGCGCTGGCAACCCTACTGATTCTTGGAAGGAGGTCTCTGAAGAGGGGCGACTGGCCTTTCAGGCTCTCTTCTCAAGAGAGGTGTTGCCACAAAGCTTTTCACCTCCCCACGATTTGAAAAAGGATATTCAGAAGGACAACTTAGTGGATAACAAACAAAAAATGGTTGATAAAATTGAAGACCTTGACAGCATGAAATGCAGTTCTGGTCAGGTAGGAGTTGAGAAGAACCTGATATTTGTAGAAAACAGAAAAGAGGAGGGACCGCTAACCATAGCGCTTGGACAAGGAAAGCTTAAGGCTTGTAGAACAGGGTTTAAACCTTACAAAAGATGTTCAGTGGAGGCCAAGGAAAATGAGGCTCGAACTGCCGGCAGCCAAGGTGAAGAGAAAGTTCCTAAGAGAATACGCTTGGAAGGGGAGGCTTCAACTTGA 2277 0.4379 MDAYSSGEEVVVKSRKPYTITKQRERWTEEEHNRFLEAIKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGVPIGQALDIDIPPPRPKRKPSNPYPRKASVGSPTSHNGAKDGKLLLSVSSSHGKQALDLKKEPLPEKPNGDERPTNIKENKDENCSKVFTIIQETPCSSVSSANKNSMSVSVPLRNSCILREFIPSVKEAITQDETNNSCVTIELENQKCKIYDGRLREQINGTIKASNLENSDASGVKLVQSKKTDDLDCAITTDGMQGNQSYPRHVPVHVLDGNLGTSTENPSQDILFQDSIFQPLGGVNGQPNLFTDSVASNTSKNNTTGSSIHQLFPAYLPFTQVLHSQDDYHSLLHMYSTFSSLIVSTLLQNPAAHAAASFAATFWPYANAETSADSPACSQGGFQSKQIGSPPNMAAIAAATVAAATAWWAAHGLLPLCAPLHSAFARPAAPAVAVPSKDTGEVTTAKEEQRETPLQNPPPQDQILDPAYSEALQAQHSASKSPAVSSSESEESGDVKLVTSSKAADHDKNKAISEHLDSNITKGRKPVDRSSCGSNTASSSDVETDALEKDQKGKEESITPDATNHLATEPGNRRSRSAGNPTDSWKEVSEEGRLAFQALFSREVLPQSFSPPHDLKKDIQKDNLVDNKQKMVDKIEDLDSMKCSSGQVGVEKNLIFVENRKEEGPLTIALGQGKLKACRTGFKPYKRCSVEAKENEARTAGSQGEEKVPKRIRLEGEAST 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0640 758 MobiDBLite consensus disorder prediction 599 622 - -
Glsi07g0640 758 SMART sant 23 71 IPR001005 -
Glsi07g0640 758 MobiDBLite consensus disorder prediction 469 626 - -
Glsi07g0640 758 SUPERFAMILY Homeodomain-like 18 74 IPR009057 -
Glsi07g0640 758 PANTHER SWI/SNF COMPLEX-RELATED 7 642 - -
Glsi07g0640 758 MobiDBLite consensus disorder prediction 86 122 - -
Glsi07g0640 758 Pfam Myb-like DNA-binding domain 24 67 IPR001005 -
Glsi07g0640 758 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Glsi07g0640 758 NCBIfam myb-like DNA-binding domain, SHAQKYF class 22 71 IPR006447 GO:0003677
Glsi07g0640 758 MobiDBLite consensus disorder prediction 730 758 - -
Glsi07g0640 758 MobiDBLite consensus disorder prediction 566 580 - -
Glsi07g0640 758 CDD SANT 26 69 IPR001005 -
Glsi07g0640 758 FunFam protein REVEILLE 6 isoform X1 26 74 - -
Glsi07g0640 758 Gene3D - 26 73 - -
Glsi07g0640 758 ProSiteProfiles SANT domain profile. 22 73 IPR017884 -
Glsi07g0640 758 MobiDBLite consensus disorder prediction 581 597 - -
Glsi07g0640 758 MobiDBLite consensus disorder prediction 538 562 - -
Glsi07g0640 758 MobiDBLite consensus disorder prediction 135 161 - -
Glsi07g0640 758 MobiDBLite consensus disorder prediction 510 534 - -
Glsi07g0640 758 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 73 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0640 Glsi-ChrGlsi07 5615866 5628454 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi07g0640 Myb_DNA-binding 1.4e-13 CL0123