Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0634 ATGGAGTTGATGCAACAAGAAGCAAAAGGGTATTCTAATAGCAGAGAGGAAGAGGAGGAAGAGGAATTAGCAGAGATAATTAGAGAAGAAAGCAGTAAGCAGTACTATCCCTTTTCTTCATCAACCTCTTTACCTTCTCCTCCTCCTTCAACGAATTATCCCAATCAAAATCTATGGTTGGGGATTGTTCATGATCATATTCATCACCAACATAAGTCTCCAGATCCCACAACCCCTTCTGAATCTTACAATTCATCATCTGGGTTAGGGTTACACCAACACCAAGATGCAGCATCAGCTTCCAATTTCGCCATTAATCATCAAAAGCTAGAGCTCATGGAGTTATCACTGGGAAACAACAAAGAAGATGAAGCCAATTTTCATGGAGGTTGTAGCAGCAGCACTGGGCTTGGCAACGATGTTAATATTGAGAAAGAGCATATGTTCGATAAAGTTGTGACACCAAGCGATGTAGGAAAACTCAATCGCTTAGTAATCCCAAAACAACACGCTGAGAGGTGCTTCCCCCTTGACTCCTCCACCAACGAGAAGGGTCTGCTTCTGAATTTCGAGGACCGGAACGGCAAGTTGTGGAGGTTTCGGTACTCCTATTGGAATAGCAGCCAGAGTTACGTGATGACAAAAGGGTGGAGCCGTTTCGTGAAGGAGAAGAAGCTTGACGCCGGCGACATTGTGTCGTTCCATCGCGGCGTTGGCGAATTGTATAGACATAGATTGTACATAGATTGGACGCGCCGACCTGATCAACATCATCATCATGGACATGATCCAACAGGCAGCCTGATTACACCTTTGCTTCTTCCGAATCAGCCGTCGCAGTACTCCGTAAGATGGGCAGGAAGATTGTACTCCCTTCCCTCACCCGTGGCACCGGCGCCGCGCCACTACCCGCACTTGCAGCAGGTGAATTACCACAATATGTATCCCTTTCATCAACTCCAGCCCCAGCAGCAGCATCAGCTCCATTATGGAAGTCATCAGAGCGAGGTGAATTTGGGATCTGGCCCCCTCTATTACCTGAGGTCGACACCCGGAGATCGAAACTTGCCCGGGCAACCAGAGGGAGGGAATAATGCTCCGATGATCATTGATTCGGTACCGGTTGCTCATGGTAAGAGCAGTAGTACTAGTAGAACTCATACTGCAGGAAAACGGCTTAGGCTATTTGGGGTGAACATGGAATGTGCTTCACCAGCTGAAGAACAACCACAATATGTGACAATGGCTAGTTCACAGCTTCCCTCTTCTCCTTCTCTTCCAACAACAAGGTTTGGGAATCAGAAAGGGGAAACTTCAGTGCTTTCTGATTTGGGTCCCTCGTTCCAATACAGGCAGTGA 1359 0.4724 MELMQQEAKGYSNSREEEEEEELAEIIREESSKQYYPFSSSTSLPSPPPSTNYPNQNLWLGIVHDHIHHQHKSPDPTTPSESYNSSSGLGLHQHQDAASASNFAINHQKLELMELSLGNNKEDEANFHGGCSSSTGLGNDVNIEKEHMFDKVVTPSDVGKLNRLVIPKQHAERCFPLDSSTNEKGLLLNFEDRNGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFHRGVGELYRHRLYIDWTRRPDQHHHHGHDPTGSLITPLLLPNQPSQYSVRWAGRLYSLPSPVAPAPRHYPHLQQVNYHNMYPFHQLQPQQQHQLHYGSHQSEVNLGSGPLYYLRSTPGDRNLPGQPEGGNNAPMIIDSVPVAHGKSSSTSRTHTAGKRLRLFGVNMECASPAEEQPQYVTMASSQLPSSPSLPTTRFGNQKGETSVLSDLGPSFQYRQ 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0634 452 FunFam B3 domain-containing protein 142 263 - -
Glsi07g0634 452 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 32 410 IPR044800 GO:0003700
Glsi07g0634 452 MobiDBLite consensus disorder prediction 410 452 - -
Glsi07g0634 452 Gene3D - 142 263 IPR015300 -
Glsi07g0634 452 SMART B3_2 149 254 IPR003340 GO:0003677
Glsi07g0634 452 MobiDBLite consensus disorder prediction 1 95 - -
Glsi07g0634 452 Pfam B3 DNA binding domain 149 252 IPR003340 GO:0003677
Glsi07g0634 452 SUPERFAMILY DNA-binding pseudobarrel domain 146 239 IPR015300 -
Glsi07g0634 452 ProSiteProfiles B3 DNA-binding domain profile. 149 249 IPR003340 GO:0003677
Glsi07g0634 452 CDD B3_DNA 147 236 IPR003340 GO:0003677
Glsi07g0634 452 Coils Coil 1 33 - -
Glsi07g0634 452 MobiDBLite consensus disorder prediction 409 452 - -
Glsi07g0634 452 MobiDBLite consensus disorder prediction 76 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0634 Glsi-ChrGlsi07 5577359 5578717 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0634 144 403 RAV Transcription Factor Family AT2G46870 52.091 1.53e-75 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Glsi07g0634 B3 2.2e-27 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g0634 07 5577359 5578717 Glsi07g0634 07 5577359 5578717 ECH