Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0632 ATGCCTGTGGGATTCAGATTCCGTCCAACAGATGAAGAACTTGTGGATCACTACCTGAGGCACAAGTTGCTGGGTGATGATGATTCCCTGGACCAGATTATTGCAGAGATTGACGTTTGCAAGGTGGAACCTTGGGACTTACCAGCGTTTTCGAAGGTGAAATCGGATGACCCAGAATGGTTCTTCTTCAGTCCTCGCGGTTTGAAGTACACAAATAGCAAACGGTCTAACAGGGCAACCAAGGCTGGCTATTGGAAGGCCACTGGTAAAGACCGTAACATCAAGATTCGAGGCACCGGTATTGTCATTGGAAGCAAGAAAACTCTGGTTTTCTATAGAGGCCGTGTTCCCCATGGAGTGAAGACCAAATGGGTCATTCACGAATATCAAGCAGTTACCTTTCCTGTTTCCCAGAGAACCTTTGTTTTATGTCGCTTAATGGAAAAAACTGAGAAGAAAGCAGAAGAGGGAAAAGATGCATTGATCAATGTTGAAAGGGATCCAAGTAGCGTTATGGTTTCTGATTATAACAATCAAGCATCAGCCGATATAATTCCAGATGTACATACTCCACCAGAAGTAAATCTGGAATCAATGTTTCCAGCAGGGGAATGTGACGTCCCTTTGATACAGCAGTCTCCGATTGTCGCTGAGCAGGAGCCGTCTTTCCAATATTCGTCATTTCCCAATTCTTACAATGAAAGTGAAAACAGCAGTATGAAGTTTCCTTTTCAAGCAACTGAAGAGAAAGACAATGTTCTTGAGGCTGTTTCTTTCAGCGAAGAATGGCATGCTTTTGTCAATGACTTCACCCCATCAGAGTCATTGACAACAGACACTGAATTTGTCTCTGCACGGTATGTCAATAGTCTGGATACTACTTCAATAGTGTGTAATGAACATGCTGGATCAAGCGAATTCCAGGTAATGAAAATGGTTAAATCATCCCATGGAGCTCTACAAGCTGGCACTCCTCCACTGCCTTCATATGAAGTAAACCAAGAGAAAAAGGACAGTATCTTTCAAGATGATTTCCTGGAAGTGGACACTTCTTCCGTTGACCTGACTGCAGATAAACATCTATCTATTTGTGTCATTGCAAGGGTTAGCTCTCCTTCACCTCCAAGGAGATCTAAAACAAAATATCATCCAAGATTAGACAACTTACTGTCACAGAGAGCTTCTGCGAGAAAAGCTCAAACACACAGGAAGGTTTCAAGAAGAGCAGCATCCCAAAATGAGGTTCAGAAGGAAAAACACATAAAGGAATCAAATAAAGATCACAGAAAATCTCAGTTTATCAGTTCAAGAAAGAATATGGAAAGCACAAGTAATGGTGCCAATAGAAGGGGTTCTTTCATCTTCTTCGAGACACCTTCCTTGAGCCAAAACCCAAATCCACGCTCAGTCTACCTTGTCAATATAATTATAGGGTTTTCTTTGCTGGTAGTCACTATCTGGGATGTCATATCATCTGGCAAGTGCTGTTAG 1491 0.4225 MPVGFRFRPTDEELVDHYLRHKLLGDDDSLDQIIAEIDVCKVEPWDLPAFSKVKSDDPEWFFFSPRGLKYTNSKRSNRATKAGYWKATGKDRNIKIRGTGIVIGSKKTLVFYRGRVPHGVKTKWVIHEYQAVTFPVSQRTFVLCRLMEKTEKKAEEGKDALINVERDPSSVMVSDYNNQASADIIPDVHTPPEVNLESMFPAGECDVPLIQQSPIVAEQEPSFQYSSFPNSYNESENSSMKFPFQATEEKDNVLEAVSFSEEWHAFVNDFTPSESLTTDTEFVSARYVNSLDTTSIVCNEHAGSSEFQVMKMVKSSHGALQAGTPPLPSYEVNQEKKDSIFQDDFLEVDTSSVDLTADKHLSICVIARVSSPSPPRRSKTKYHPRLDNLLSQRASARKAQTHRKVSRRAASQNEVQKEKHIKESNKDHRKSQFISSRKNMESTSNGANRRGSFIFFETPSLSQNPNPRSVYLVNIIIGFSLLVVTIWDVISSGKCC 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0632 496 Coils Coil 147 167 - -
Glsi07g0632 496 SUPERFAMILY NAC domain 1 148 IPR036093 GO:0003677|GO:0006355
Glsi07g0632 496 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 285 - -
Glsi07g0632 496 ProSiteProfiles NAC domain profile. 1 149 IPR003441 GO:0003677|GO:0006355
Glsi07g0632 496 Pfam No apical meristem (NAM) protein 2 130 IPR003441 GO:0003677|GO:0006355
Glsi07g0632 496 Gene3D NAC domain 10 154 IPR036093 GO:0003677|GO:0006355
Glsi07g0632 496 MobiDBLite consensus disorder prediction 407 435 - -
Glsi07g0632 496 MobiDBLite consensus disorder prediction 394 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0632 Glsi-ChrGlsi07 5559655 5562411 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0632 1 153 NAC Transcription Factor Family AT4G35580 59.119 4.34e-57 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi07g0632 NAM 2.5e-34 No_clan