Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0631 ATGGCGAACTTAATTTCTATGCTGGATCATGTGCCTGTAGGATTCAGATTCCGTCCGACAGATGAAGAGCTTGTGGATCACTACCTGAAGAACAAGTTGCTGGGTGATGATTTCCTTGTCCAGATTATCCCTCAGATTGACATGTGCAATCATGAACCTTGGGACATACCAGATCTTTCGGTGATAAAGTCCGATGACGAATGGTTTTTCTTCAGTCCTCCCCAGTTCAGGTACTCTAACAGTACCCGATTAAACAGGGCAACAGAGCGTGGCTTCTGGAAGGCCACTGGTAAAGACCGTAAAATCAAGGTTCGAGGTACCAACGACGTCATTGGGACCAAGAAGACTCTGGTTTTCTATAAAGGTCGCGTTCCTAATGGCGTCAAGACCAATTGGGTTATTCATGAATATCATGCAGTCACCTTTCCTCCTAGCCAGGGGACCTTTGTTCTGTGCCGGTTAATGAAGAAACCTGATAAGAAAGCAGAAGAGAGAACTGATGAAATGGTCTATGATGAAGGGGAGCCAAGTAGCCTTATGGTTTCTGACTATGAAAATCCAGCAACTGTGGACAGAGTTCAAGATGTATCTGCTTTGCTATTAGGGAACCTGGAATCAAACTTTTGGACACCAAACCAGGAAGATGAATATGACTTGTCCTCAATACAGCAGTCTCCAATTACCATTGGGCAAGAACCATCTTTACAATATTCCCCATTTCTCGATTCATATATTACAAATGATAACAGCACTTCGCACTTTCCATGTGAAACTACTGAAGACGAAGGGTTGGCGGAGTTTGTGAATTCAATGTTGGTTGATGACGATGAGGGCTTCATCGAAGAAAGAAGAAATGCTTTTGTCAATTCCAACCCCTCTGAGTTATCGAAAACGGTCTACTACTATGGAAGCAGTGACACAGACGCTGAAGTTGTCTCTGTACGGTATGGCAATATTCTGGATACTCCGATAGTATGTAATAAAAATGCTGGTTCAAGGGAAAGCCGGGTTATGAAAATGGTTAAATCTTCCCCCGGTTCTGACCTTACTGGCACTGCTCAGATGTCATCTAACCATGAAGCAAAAAGAGAGAAAAAGGACCATTTCTTTCAAGATGATTTCTGGGAAGTTGACACTTCCTCTGGTGACTCAACCACAGCTAAGCCATTGAAGATCAATAATATTGAAATTTCTAGCTTTCCTTCCACTCTAAGGACATGCAAAACTCAATATCAACCAAGATCAGACAACTCTGTGTTGCTGAGAGCTGGGACAAGAAGATCTCAAACACAGAGGAAGGTTTCAACCAAATCAGTATCCCATCATGAGGCTCAGAAAGAAACGCGCAATGTGGAATCAAACAAATCTCAGAGAAAAGCCCAGGGTACCACTTTAAGAAACACTTTGGTAGCCCCAAGCAATCAGTCCTCTGATACCAATGGGAGGGGTTCTTTTGTCCACCTAGAGACCCCTTCAATGAGCCAAAACCTCAGTCCACGCTCGGTATATCTCGTCAATTTAGTTATAGGGTTTTCGTTGTTTGTAGTCATTATTTGGGAACTATTGTCATGTGGGAGGTTCTATTAG 1587 0.4304 MANLISMLDHVPVGFRFRPTDEELVDHYLKNKLLGDDFLVQIIPQIDMCNHEPWDIPDLSVIKSDDEWFFFSPPQFRYSNSTRLNRATERGFWKATGKDRKIKVRGTNDVIGTKKTLVFYKGRVPNGVKTNWVIHEYHAVTFPPSQGTFVLCRLMKKPDKKAEERTDEMVYDEGEPSSLMVSDYENPATVDRVQDVSALLLGNLESNFWTPNQEDEYDLSSIQQSPITIGQEPSLQYSPFLDSYITNDNSTSHFPCETTEDEGLAEFVNSMLVDDDEGFIEERRNAFVNSNPSELSKTVYYYGSSDTDAEVVSVRYGNILDTPIVCNKNAGSRESRVMKMVKSSPGSDLTGTAQMSSNHEAKREKKDHFFQDDFWEVDTSSGDSTTAKPLKINNIEISSFPSTLRTCKTQYQPRSDNSVLLRAGTRRSQTQRKVSTKSVSHHEAQKETRNVESNKSQRKAQGTTLRNTLVAPSNQSSDTNGRGSFVHLETPSMSQNLSPRSVYLVNLVIGFSLFVVIIWELLSCGRFY 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0631 528 MobiDBLite consensus disorder prediction 409 435 - -
Glsi07g0631 528 MobiDBLite consensus disorder prediction 455 487 - -
Glsi07g0631 528 MobiDBLite consensus disorder prediction 436 454 - -
Glsi07g0631 528 MobiDBLite consensus disorder prediction 342 365 - -
Glsi07g0631 528 MobiDBLite consensus disorder prediction 409 487 - -
Glsi07g0631 528 Gene3D NAC domain 20 162 IPR036093 GO:0003677|GO:0006355
Glsi07g0631 528 ProSiteProfiles NAC domain profile. 11 157 IPR003441 GO:0003677|GO:0006355
Glsi07g0631 528 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 10 383 - -
Glsi07g0631 528 Pfam No apical meristem (NAM) protein 12 138 IPR003441 GO:0003677|GO:0006355
Glsi07g0631 528 SUPERFAMILY NAC domain 6 157 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0631 Glsi-ChrGlsi07 5553611 5556605 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0631 8 171 NAC Transcription Factor Family AT4G35580 53.801 8.22e-56 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi07g0631 NAM 5.7e-33 No_clan